PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364813.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 573aa MW: 64782.2 Da PI: 5.2033

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40	7.1e-13	329	372	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ +Lr+l+P + Kl+ a+iL A+eY+k+Lq XP_027364813.1 329 VAERKRRKKLNDRLYNLRSLVPRiS------KLDRASILGDAIEYVKDLQ 372 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MNIIMQNLIE RLRPLVGLNG WDYCISWKLS EDQSFLEWLG CCCAGTESNQ NDGEEHIFPV 60 SSVAPCRDTM FPHSRTKPCD LLSHLTTSIP IDNSGIHAQT LLTNQPNWVN YSNGLDPNIL 120 EETIGTQVLI PVPGGLVELF VTKQVPEDHQ VIDFVTTQCI ALVEHSISFN IDVNSMSNMQ 180 PNPLENEGNK RNNLFQPSET SNLPHDIPMD RIGLCTSPLN LMQQFNYNQQ NRMKKDAFSE 240 EYQGSFLHDK QTNPLKSISE EDHDAYQQCM MTDSQYVDMT EKQEHDKDLL KHVVGRSDSM 300 SDCSDQNEEE EGGKYRRRNG KGNQSKNLVA ERKRRKKLND RLYNLRSLVP RISKLDRASI 360 LGDAIEYVKD LQKQVKELQD ELEENSDTGA ESNCINANNN NNNQYVGVGE LGPKAEHGKT 420 QTGFHVGTSG NGYVTKLKQE DAAAMDKQTQ QMEPQVEVAL IDGNEYFVKV FCEHRPGGFV 480 KLMEALNTLG MDVVHATVTS HKGLVSNVFK VEKKDSEMVE AEDVRDSLME LTRNRSRGWT 540 HEMTATSDNG VSRDQHHLSS HQMGAYHPHQ FHS

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MNIIMQNLIE RLRPLVGLNG WDYCISWKLS EDQSFLEWLG CCCAGTESNQ NDGEEHIFPV  60
SSVAPCRDTM FPHSRTKPCD LLSHLTTSIP IDNSGIHAQT LLTNQPNWVN YSNGLDPNIL  120
EETIGTQVLI PVPGGLVELF VTKQVPEDHQ VIDFVTTQCI ALVEHSISFN IDVNSMSNMQ  180
PNPLENEGNK RNNLFQPSET SNLPHDIPMD RIGLCTSPLN LMQQFNYNQQ NRMKKDAFSE  240
EYQGSFLHDK QTNPLKSISE EDHDAYQQCM MTDSQYVDMT EKQEHDKDLL KHVVGRSDSM  300
SDCSDQNEEE EGGKYRRRNG KGNQSKNLVA ERKRRKKLND RLYNLRSLVP RISKLDRASI  360
LGDAIEYVKD LQKQVKELQD ELEENSDTGA ESNCINANNN NNNQYVGVGE LGPKAEHGKT  420
QTGFHVGTSG NGYVTKLKQE DAAAMDKQTQ QMEPQVEVAL IDGNEYFVKV FCEHRPGGFV  480
KLMEALNTLG MDVVHATVTS HKGLVSNVFK VEKKDSEMVE AEDVRDSLME LTRNRSRGWT  540
HEMTATSDNG VSRDQHHLSS HQMGAYHPHQ FHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	337	RRRNGKGNQSKNLVAERKRRKK
2	331	338	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-153	bHLH family protein