PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027364764.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | HB-PHD | ||||||||
Protein Properties | Length: 1106aa MW: 122864 Da PI: 4.7337 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 40.5 | 4.5e-13 | 971 | 1016 | 11 | 56 |
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 l++L + F++n+yp+++++e LA++lg+t +qV WF N R + XP_027364764.1 971 ALQRLHKSFKENQYPDRTTKESLAQELGITFQQVAKWFDNTRWSFR 1016 689***************************************8766 PP | |||||||
2 | PHD | 37.9 | 4.1e-13 | 615 | 670 | 1 | 51 |
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C++ ++++++lCdg C++ fH+ Cl+++l +e++p g wlC+ C++k XP_027364764.1 615 FCAKCQSkeLSTNNDIILCDGvCDRGFHQFCLDPPLLTEDIPPGdeGWLCPGCECK 670 699***977777********77********************9999*******985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1106 aa Download sequence |
MRQGRIYGVY SLVSSNGGPD LEESVNEAPF FPLFGAEIKK RGLSRKLNSF SLPHPILDRT 60 LLPPRTALPI RCGYDCATHT HNLLALHSDD GGGCCGHVCF LVPMTSSSHN NSTTEQMGSE 120 QCDLSEKKPQ ISSGCLDSKQ RELGTVLNNS VIDEKSNHIS ANVTENSVIQ LLAPPQHDLD 180 KSRQIVEGPC LQRSTIEQVS INLSNDKPEN KCQPLCENIQ TQPVEINDAV NAFVVEDQMQ 240 SIAAEGSCLQ QSTIEQVSVH LDNDKPENEC QALSENVQTE PVEINDAAFV VEDQTQSIPV 300 EGSCLPQNTI EQVSVQLFND KPENECQPLS ENVQTEPVEI NDAAFVVEDQ TQSIPVEGSC 360 LPQNTIEQIS VQLFNDKPEN ECQPLSENVQ TEPVEINNAV TSLVVKDQTQ FFSAQVNTSS 420 VNELLGPPSG NVAKNISFNC SERKPNSTTH SRLRHRGKRN SKLLKKKYML RSLGSSDRAL 480 RSRTREKPKA PEPNSNLVDG NNDGVKRKSG RRKKKRREDG ITDQFSRIRT HLRYLLNRIS 540 YEKSLIDAYS GEGWKGYSME KLKPEKELQR AKSEILRRKL KIRDLFRNLD SLCAEGKLPE 600 SLFDSKGEID SEDIFCAKCQ SKELSTNNDI ILCDGVCDRG FHQFCLDPPL LTEDIPPGDE 660 GWLCPGCECK DDCIELVNDS LGSSLSLSDT WERVFPEAAT AAGNNMDSNL GLPSDDSDDD 720 DYNPNGPEDV EVEGDESSSD ESEYASASEK LQSSHEDQYL GLPSEDSEDD DYDPNRADVD 780 CKIAEESSSS DFTSDSEDLA AIQDKRSPGQ DEDIVSVSLD DVKNLKGSGK QKGKVDKKPS 840 MADELSSLLE PDPGQEGSTP VSGKRHVERL DYKRLYDETY RSDTSEDEDW TATATPSSKK 900 KLTANVTLVS PNGNASNNPR HTPMRNTHQN RAENTDNSPA KSVDSCVKYD SRDNKSGSSA 960 YKRVKRLGEV ALQRLHKSFK ENQYPDRTTK ESLAQELGIT FQQVAKWFDN TRWSFRHSSQ 1020 MESDPGKNIL WLGNEGKAKN EGERKCELMS PEVSGENSKS SSYRKRKHLS ESQASETQLD 1080 IDGSATSTPN AHEIQIGNKM KTRKRK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 511 | 516 | RRKKKR |
2 | 511 | 517 | RRKKKRR |
3 | 511 | 518 | RRKKKRRE |
4 | 513 | 517 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19510.1 | 9e-88 | HB-PHD family protein |