PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364764.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HB-PHD
Protein Properties Length: 1106aa    MW: 122864 Da    PI: 4.7337
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364764.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox40.54.5e-1397110161156
                      HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56  
                       l++L + F++n+yp+++++e LA++lg+t +qV  WF N R   +
  XP_027364764.1  971 ALQRLHKSFKENQYPDRTTKESLAQELGITFQQVAKWFDNTRWSFR 1016
                      689***************************************8766 PP

2PHD37.94.1e-13615670151
                     SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
             PHD   1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                     +C+ C++    ++++++lCdg C++ fH+ Cl+++l +e++p g   wlC+ C++k
  XP_027364764.1 615 FCAKCQSkeLSTNNDIILCDGvCDRGFHQFCLDPPLLTEDIPPGdeGWLCPGCECK 670
                     699***977777********77********************9999*******985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1106 aa     Download sequence    
MRQGRIYGVY SLVSSNGGPD LEESVNEAPF FPLFGAEIKK RGLSRKLNSF SLPHPILDRT  60
LLPPRTALPI RCGYDCATHT HNLLALHSDD GGGCCGHVCF LVPMTSSSHN NSTTEQMGSE  120
QCDLSEKKPQ ISSGCLDSKQ RELGTVLNNS VIDEKSNHIS ANVTENSVIQ LLAPPQHDLD  180
KSRQIVEGPC LQRSTIEQVS INLSNDKPEN KCQPLCENIQ TQPVEINDAV NAFVVEDQMQ  240
SIAAEGSCLQ QSTIEQVSVH LDNDKPENEC QALSENVQTE PVEINDAAFV VEDQTQSIPV  300
EGSCLPQNTI EQVSVQLFND KPENECQPLS ENVQTEPVEI NDAAFVVEDQ TQSIPVEGSC  360
LPQNTIEQIS VQLFNDKPEN ECQPLSENVQ TEPVEINNAV TSLVVKDQTQ FFSAQVNTSS  420
VNELLGPPSG NVAKNISFNC SERKPNSTTH SRLRHRGKRN SKLLKKKYML RSLGSSDRAL  480
RSRTREKPKA PEPNSNLVDG NNDGVKRKSG RRKKKRREDG ITDQFSRIRT HLRYLLNRIS  540
YEKSLIDAYS GEGWKGYSME KLKPEKELQR AKSEILRRKL KIRDLFRNLD SLCAEGKLPE  600
SLFDSKGEID SEDIFCAKCQ SKELSTNNDI ILCDGVCDRG FHQFCLDPPL LTEDIPPGDE  660
GWLCPGCECK DDCIELVNDS LGSSLSLSDT WERVFPEAAT AAGNNMDSNL GLPSDDSDDD  720
DYNPNGPEDV EVEGDESSSD ESEYASASEK LQSSHEDQYL GLPSEDSEDD DYDPNRADVD  780
CKIAEESSSS DFTSDSEDLA AIQDKRSPGQ DEDIVSVSLD DVKNLKGSGK QKGKVDKKPS  840
MADELSSLLE PDPGQEGSTP VSGKRHVERL DYKRLYDETY RSDTSEDEDW TATATPSSKK  900
KLTANVTLVS PNGNASNNPR HTPMRNTHQN RAENTDNSPA KSVDSCVKYD SRDNKSGSSA  960
YKRVKRLGEV ALQRLHKSFK ENQYPDRTTK ESLAQELGIT FQQVAKWFDN TRWSFRHSSQ  1020
MESDPGKNIL WLGNEGKAKN EGERKCELMS PEVSGENSKS SSYRKRKHLS ESQASETQLD  1080
IDGSATSTPN AHEIQIGNKM KTRKRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1511516RRKKKR
2511517RRKKKRR
3511518RRKKKRRE
4513517KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.19e-88HB-PHD family protein