PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364754.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 238aa    MW: 26812.7 Da    PI: 10.1467
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.57.3e-231664149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ +n+sn qvtfskRr g++KKA+EL++LC+a+va+++fs+  k++ +
  XP_027364754.1 16 KKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSF 64
                    5689***************************************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MSSLRKSRGR QKIEMKKMSN ESNLQVTFSK RRSGLFKKAS ELCTLCGADV ALVVFSPGEK  60
VFSFGHPNVD AVIDRYLSRA PPPNSGTMQF IEAHRSANVR ELNAQLTQIN NQLDTERKRG  120
EELSRMRKAA QAQFWWAEPF EEMNRAQLEE LKGALEELKK HVARLADRLL VQTAANPAQY  180
FTGASSSNLV HQPPPPQVFP PQMLQPSMFP NHMFDGSMMR YHAYNSMGMG GFGPAGFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-61M-type_MADS family protein