PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364753.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 221aa    MW: 25072.7 Da    PI: 9.9431
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.17.3e-211865249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +i  ks  qvtfskRr g++KKA+EL++LC++e+a+++fs+ +k + +
  XP_027364753.1 18 KIPKKSHLQVTFSKRRSGLFKKASELCTLCGVEIAIVVFSPADKAFSF 65
                    57789999*********************************9987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MSKNKKSSLG RQKIPIEKIP KKSHLQVTFS KRRSGLFKKA SELCTLCGVE IAIVVFSPAD  60
KAFSFGHPEV ESLIDRYMTR NPPQESSAHQ LVEAHRNANV RDLNMQLTQL FNHLEIEKKR  120
GEELDHVRKA RQRQFWWESP IDELGLHELL QVKASIEELK KNIEKHATKF MMDQSNISPS  180
PIVGANGLAH YDAFENKSGG GINIASTLPN AHYLGFRNGY L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-58M-type_MADS family protein