PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027364741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | WRKY | ||||||||
Protein Properties | Length: 469aa MW: 51617.8 Da PI: 9.2309 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75.1 | 8.6e-24 | 159 | 215 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk ++ +++ ++v+ei+Y+++H h+ XP_027364741.1 159 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCYAKK-IKFCDHSGHVIEIVYRSQHSHD 215 7********************************98.999999***************7 PP | |||||||
2 | WRKY | 92.1 | 4.2e-29 | 332 | 388 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++ r+YYrCtsagCpv+k++e++ ++ k+++itY+g H+h+ XP_027364741.1 332 DGYRWRKYGQKMVKGNPHFRNYYRCTSAGCPVRKHIETAVDNSKALIITYKGVHDHD 388 9*******************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 469 aa Download sequence |
MEDEEETRHR VTDSSLATES HASTPPHDLP RNSETLVIPS SFTHHHAITP DMQGSSTARK 60 RRKDESKEPA QPPDEETIVS DAVEAPQKLT EKSVCSSSFS ELSPTSASQS LSSAPSPTLP 120 EQRLSSPKTN SVQVLAVDKR TTSGGKTLPS VSVESGSASD GYNWRKYGQK QVKSPTGSRS 180 YYRCTHSNCY AKKIKFCDHS GHVIEIVYRS QHSHDPPHKT DFTKESKFMP SNEPKVESTV 240 PKQSIRVLND SDQSSSPKEP LQKVPCSADK KLQNSSNGEN GKVMLKEEHV DDPEPKRRMN 300 KSDLTSLDST VKPGKKPKLV VHAAGDVGIS GDGYRWRKYG QKMVKGNPHF RNYYRCTSAG 360 CPVRKHIETA VDNSKALIIT YKGVHDHDMP VPKKRHGPPS APLVAAAAPA SMNNMQFKKT 420 DLLQNRKTPT RWSVDTEGEL TGEALDLGGE KAIESARTLL SIGFEIKPC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 59 | 64 | RKRRKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-113 | WRKY family protein |