PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027364725.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 26352.1 Da PI: 9.505 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.7 | 3.6e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+nk+nrqvtfskRr g+lKKA+ELSvLCdae+a+iifss+gkl+ yss XP_027364725.1 9 ERIQNKINRQVTFSKRRSGLLKKAFELSVLCDAEIALIIFSSRGKLFQYSS 59 69***********************************************96 PP | |||||||
2 | K-box | 69 | 1.6e-23 | 78 | 171 | 5 | 98 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ e +++ l+qel L+ + e+L+r+qR++lGe+Le+LslkeLq+Le+qL+k + + R+++++ l++ i+el +k ++l+e nk L++k XP_027364725.1 78 KTSDIVELQSQCLYQELLILRVKHESLERSQRNFLGEELEPLSLKELQSLEKQLDKTIAQARKHQTQKLMARIDELCEKVQNLEEVNKHLESKE 171 4555778889********************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MGRGRVVLER IQNKINRQVT FSKRRSGLLK KAFELSVLCD AEIALIIFSS RGKLFQYSST 60 DINRIIEKYR QCCFNMSKTS DIVELQSQCL YQELLILRVK HESLERSQRN FLGEELEPLS 120 LKELQSLEKQ LDKTIAQARK HQTQKLMARI DELCEKVQNL EEVNKHLESK ERDKCTQQIC 180 EGSTNSTPFV YNNNHIQVNQ FQSGTTGWFR RQQAAASKGK AIDRHGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 5e-56 | MIKC_MADS family protein |