PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027364723.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 24635.2 Da PI: 9.6186 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.5 | 9.7e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien + rqvtfskRrng+lKKA+ELSvLCda+vaviifs++g+l+e+ss XP_027364723.1 9 KKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVAVIIFSQRGRLFEFSS 59 68***********************************************96 PP | |||||||
2 | K-box | 67.3 | 5.1e-23 | 77 | 172 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++l ++ ++l+ ++a + ++ie L+ + R+llG +L+++s+ eLq +e+qL +sl ++R +K el++eqie+lq e +l +en +L+++++ XP_027364723.1 77 HTNKLRDEYIQQLKFDSASMAEKIEHLELSRRKLLGHNLSPCSYGELQGIEDQLLRSLHSVRLRKAELYMEQIEHLQSLESNLVKENAELNAMWA 171 4556899999********************************************************************************99987 PP K-box 100 e 100 e XP_027364723.1 172 E 172 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVRGKIQMKK IENATSRQVT FSKRRNGLLK KAYELSVLCD AQVAVIIFSQ RGRLFEFSSS 60 DMTKILERHR KYSKDVHTNK LRDEYIQQLK FDSASMAEKI EHLELSRRKL LGHNLSPCSY 120 GELQGIEDQL LRSLHSVRLR KAELYMEQIE HLQSLESNLV KENAELNAMW AEKTSQQQCG 180 RHKQAEAEAA PRCSNSQSLD VETDLFIGLP KQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 2e-74 | MIKC_MADS family protein |