PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027364721.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 150aa MW: 17050.6 Da PI: 8.0548 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 97.3 | 1.6e-30 | 5 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee..redamsslvy.eAearardPvyGavgvilklqqqleqlka 92 +CaaCk+++rkC++dC+++pyfp ++p+++ vh+++G snv k+l+ ++ + e+ ++++y eAe+r++dP+yG++g i++ qq++++++ XP_027364721.1 5 RCAACKIQGRKCPSDCIFSPYFPLNDPQRYTSVHRIYGGSNVGKMLQCFSKFHplSEHRQQTVLYdEAECRIQDPIYGCYGNISERVQQINSTES 99 6************************************************876645688889999979**************************** PP DUF260 93 elallkee 100 ela+++++ XP_027364721.1 100 ELAKIQSH 107 ***99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MVSSRCAACK IQGRKCPSDC IFSPYFPLND PQRYTSVHRI YGGSNVGKML QCFSKFHPLS 60 EHRQQTVLYD EAECRIQDPI YGCYGNISER VQQINSTESE LAKIQSHISI LKLQNPQLVN 120 ESNFDVLLHR AELDRFSLAA MQAKLLGLII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 3e-35 | LBD family protein |