PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027364661.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32211.1 Da PI: 8.1153 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l+++v+ +G g W+ +++ g++R++k+ ++rw++yl XP_027364661.1 15 RGAWSAEEDQILINYVQVHGEGKWRELSKRAGLKRSGKSSRLRWLNYL 62 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.3 | 4.7e-15 | 68 | 110 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ + +E++l+++++++lG++ W++Ia +++ gRt++++k++w+ XP_027364661.1 68 RGNISSDEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWN 110 78999*****************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MPRKTSCENQ DAVNRGAWSA EEDQILINYV QVHGEGKWRE LSKRAGLKRS GKSSRLRWLN 60 YLKPDVKRGN ISSDEEDLII RLHNLLGNRW SLIAGRLPGR TDNEIKNYWN ARLRKKLEKK 120 KCNHSITPHL HSNKVPSKLR VEPVECTKNS SHGIATTKSS IPTKVMVSKY AANDSVNTMN 180 SVTCWDSHNP SACTPEDDHD NCSSGFHKPF EICDQLMISY EDSHYGYACV EIPEHFGDEA 240 TCWLDDSIDQ VTQKSTKSNS MSCLNEQNPS TLHGGTTMST SNFIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-55 | MYB family protein |