PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364650.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 523aa MW: 60032.8 Da PI: 6.3206

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.2	5.4e-29	120	205	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l L+e+r+++++++r++++k+plW e+s+ m +e g++rs k+Ckek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_027364650.1 120 RWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMaEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASR--QDGKHYRFFRQLEA 205 8***********************************7778*************************8..55667*****85 PP
2	trihelix	49.2	1.4e-15	436	506	1	70
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 rWt+ e+ Li++r+ e+rlr+ g l+ +lWee+++k++ gf rs+ +Ck+ w+++++ +++ e ++ XP_027364650.1 436 RWTEMEISNLIQLRTGFEQRLREnGYLENGLWEEIAAKLACLGFDRSASECKQIWDEISMSLRRTVEYDSA 506 8*******************8568***********************************99887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MGDPYGLQED LRRLISARTH LSTTNTHLLE PLCVHHALSA VAASTTPPNT YDPIMDANAF 60 YPRSFTHFTH HDYSSSNVNA TTSTTAVAAA TVSDHATTTP FCSIESAEKG WLGFDSGNNR 120 WPRQETLSLL EIRSRLDSKF RENNQKAPLW NEISRIMAEE FGYQRSGKKC KEKFENLYKY 180 YKKTKEGKAS RQDGKHYRFF RQLEAICGEA NNNDASTPDK THRAGGNTAN IQIPSLTINQ 240 DHNGDVSNNN IKCSESLSIS NSSEFETSSS ENNDEDLSAV AYMMKQSREK QKGLDLDQKQ 300 SGHRRVRKSW RAKVEEIVDS HMRKIIKTQD AWMERMLRVV EQREQEMASK EEERKRKESM 360 RFDQQVHELW AKEKAWVEAR DAALIEVVRK HIGIELETLP LYEAMVEEEP PNKNKSQGTI 420 DANEYPSEGV DHRSSRWTEM EISNLIQLRT GFEQRLRENG YLENGLWEEI AAKLACLGFD 480 RSASECKQIW DEISMSLRRT VEYDSAKTRP WCLGLKLTDD DDL

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MGDPYGLQED LRRLISARTH LSTTNTHLLE PLCVHHALSA VAASTTPPNT YDPIMDANAF  60
YPRSFTHFTH HDYSSSNVNA TTSTTAVAAA TVSDHATTTP FCSIESAEKG WLGFDSGNNR  120
WPRQETLSLL EIRSRLDSKF RENNQKAPLW NEISRIMAEE FGYQRSGKKC KEKFENLYKY  180
YKKTKEGKAS RQDGKHYRFF RQLEAICGEA NNNDASTPDK THRAGGNTAN IQIPSLTINQ  240
DHNGDVSNNN IKCSESLSIS NSSEFETSSS ENNDEDLSAV AYMMKQSREK QKGLDLDQKQ  300
SGHRRVRKSW RAKVEEIVDS HMRKIIKTQD AWMERMLRVV EQREQEMASK EEERKRKESM  360
RFDQQVHELW AKEKAWVEAR DAALIEVVRK HIGIELETLP LYEAMVEEEP PNKNKSQGTI  420
DANEYPSEGV DHRSSRWTEM EISNLIQLRT GFEQRLRENG YLENGLWEEI AAKLACLGFD  480
RSASECKQIW DEISMSLRRT VEYDSAKTRP WCLGLKLTDD DDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	4e-80	Trihelix family protein