PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027364560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 25252 Da PI: 9.8905 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++G g+W++ ++ g+ R++k+c++rw +yl XP_027364560.1 14 KGPWTPEEDQILISHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e++++++ lG++ W++Ia++++ gRt++++k++w+++l XP_027364560.1 67 RGKFSKEEEEIILKLHGILGNR-WSSIAAKLP-GRTDNEIKNFWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MVRTPCCEKM GLKKGPWTPE EDQILISHIQ LYGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGKF SKEEEEIILK LHGILGNRWS SIAAKLPGRT DNEIKNFWHT HLKKRLERSE 120 VHSMMNASSN PLQEAQAASS SGTLINMARV GVDGATTSSV TGKVLIANDS LHLRRNPSIR 180 LGLYGAVSSD MSGGTIGNNS PSEFGEEMEF WYNMFMSSHH KGMEM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 8e-74 | MYB family protein |