PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364471.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 225aa    MW: 24707.6 Da    PI: 5.2401
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC177.41.4e-55451491102
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     ql++fw++q   i++++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdfl
  XP_027364471.1  45 QLQMFWSYQrqeIDHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 139
                     89*****9988899********************************************************************************* PP

           NF-YC  93 vdivprdelk 102
                     vdivprd++k
  XP_027364471.1 140 VDIVPRDDIK 149
                     *******975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDSNQQGTQP QTQNQTQGGG YQGGAGTPGT GAPSFQHLLH QQQQQLQMFW SYQRQEIDHV  60
NDFKNHQLPL ARIKKIMKAD EDVRMISAEA PILFAKACEL FILELTIRSW LHAEENKRRT  120
LQKNDIAAAI TRTDIFDFLV DIVPRDDIKD DAALVAATAS GVPYYYPPIG QPAGIMIGRP  180
AVDPATGVYV QPPSQAWQSV WQSAAEDASY ATGGSGAQGN LDGQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.11e-101NF-YC family protein