PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364327.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 245aa    MW: 27961.9 Da    PI: 6.3081
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364327.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.41.1e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ien   rqvtfskRrng+lKKA+ELSvLCdaevaviifsstgklye+s+
  XP_027364327.1  9 KKIENLNSRQVTFSKRRNGLLKKAKELSVLCDAEVAVIIFSSTGKLYEFSN 59
                    68***********************************************95 PP
2K-box65.71.7e-229017317100
           K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     ++ + + Lk+ei +L++   +++G++L+ LslkeLq+Le+qL +++ ++++kK+++l+eq+++++ +e+++  en+ Lrk+lee
  XP_027364327.1  90 MEPDTKLLKDEITKLRSAYVRMMGKELDGLSLKELQHLENQLSEGILSVKDKKEQVLVEQLRRSRLQEQKTVLENEVLRKQLEE 173
                     5667789**************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGRGKIEIKK IENLNSRQVT FSKRRNGLLK KAKELSVLCD AEVAVIIFSS TGKLYEFSNT  60
SMEHTLSRYS KGMESDCAEE PIDEPPADVM EPDTKLLKDE ITKLRSAYVR MMGKELDGLS  120
LKELQHLENQ LSEGILSVKD KKEQVLVEQL RRSRLQEQKT VLENEVLRKQ LEEVQNKTKT  180
QFLQFNCLDR TISMNGSKPL FNCASEDNEI SDTTLQLGLS TDYGHQRKIL KTEPCNDSWS  240
QVASQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.12e-64MIKC_MADS family protein