PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027363876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1138aa MW: 127985 Da PI: 9.3237 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.7 | 3.7e-10 | 50 | 85 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ Wk++a+ + +R+ +++ XP_027363876.1 50 QWSKEELERFYEAYRKYGKD-WKKVAAVVR-NRSTEMV 85 6*****************99.*********.**98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1138 aa Download sequence |
MAPTRKSRSV NKRISSSNDI SPEKDGVNSG VNSSKSKQRK KKLTDKLGSQ WSKEELERFY 60 EAYRKYGKDW KKVAAVVRNR STEMVEALYS MNRAYLSLPE GTASVVGLIA MMTDHYNVLE 120 GTDSERESND ASGSRKPVKR KREKVRFCVS KDPVQSQSIP SSDGCLSLLK RRRVDGIQPR 180 VVGKRTPRVP VCYSYKRDDT ENYASPNKKI LKSAVDANDD EVAHVVALAL TEAAQRGGSP 240 QVSQTPYRRI EQKSSSPIRS WERKHQMSKT ARVKVRDVSA DEEFLEGSIE SQGAENGEYA 300 RDNSSLLDME GIGTVKVLQK GGKFYRKKER VENVGNHQLD DGGEACSGTE EGFSFSSLKE 360 KDYIEVTNEK LEKFSKRNQR NRNKKLFFGD ETLALNALQT LADLSLMMPT STIESESSIQ 420 LKRERMTTDK DDKFALPEAT STSHKRHKLK HTVVPEIELS TFKKSKLGKE LAKDTNALSE 480 SKEQLPFADA TWKRKRKSMV SKVANAKLNS YPSGPLKNEA VDDENKPIIK GKHIDQVFTL 540 PKQLKIVRSS ESSLCSDQQN LTVSTAEVPL ISGVSLPTKR SRRKMILQRA FMPKETSSDN 600 ILKSQPDKYS TLKEKLSSCL SSCMVGRWFI FEWFYSAIDY PWFAKREFME YLNHVGLGNI 660 PRLTRVEWSV IKSSLGKPRR FSEHFLREER LKLEQYRESV RKHYTELQTG IRDGLPTDLA 720 RPLYVGQRVI ALHPKTREIH DGSVLTVDYD KCRIQFDCPE LGVEFVMDID CMPLNPLDNM 780 PEALRRQIGA RKASLLTKEP QINGKSCFGG CETCTSPVKV HTSSSALVKQ GKAKVAAIDN 840 LCAQAGYTQL CKVTHHQAKE ADIHALSELK RALDKKDTLL MELQKAHSDI LENQNGIQCF 900 KDSESFKKYY ATVLVELKEA SGQVSDTMLQ LRQRNTCTGN SLPPWMNPQA SFNVHGDLSS 960 MLDSSVMLES GSTVVEIIKG SRLRANAMVD AAFQEDEDAF MKIGQALDSM NHQQLASKSQ 1020 LPMIRSQEQV NGGFYHHNHS TSCITEHLLN DVCGPKLQNA SDKVDAEIPS ELITSCVATL 1080 IMIQTCTERQ YPPADVAQIL DSAVTSLQPC CPRNLRIYRE IQMCMGRIKT QILALIPA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 170 | 174 | KRRRV |
2 | 170 | 212 | KRRRVDGIQPRVVGKRTPRVPVCYSYKRDDTENYASPNKKILK |
3 | 578 | 585 | TKRSRRKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |