PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363849.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 698aa MW: 77002.4 Da PI: 7.3662

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.1	3.5e-23	117	218	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + + +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_027363849.1 117 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--NILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 207 89**************************997656666..69999****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_027363849.1 208 NGDLCVGIRRA 218 8999**997 PP
2	Auxin_resp	108.2	8.9e-36	286	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a++k++FevvY Prast+eF+vk+ +e+al+++++ G Rfkmafetedss++++ +Gt+++v+ +dp++WpnS+Wr+L+ XP_027363849.1 286 AATLAANKQPFEVVYFPRASTPEFCVKAPLIETALQIRWCSGIRFKMAFETEDSSRISWfMGTISSVQVADPLNWPNSPWRLLQ 369 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MITFMDSKEK SKEVERCLDP QLWHACAGGM VQMPAVNTKV YYFPQGHAEH ACGPVNFRAC 60 PKVPPLVPCK VVAIKYLADP ETDEVYAKLR LVPMNTNDVD YDRDAVGPET QEKPASFAKT 120 LTQSDANNGG GFSVPRYCAE TIFPRLDYSA DPPVQNILAK DVHGETWKFR HIYRGTPRRH 180 LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKK GIGGGPEASS GWNPAGGNCA 240 GPYGGFSPFL REDESRILRN GNSNGMNPSV SMMGRGKVRP EAVIEAATLA ANKQPFEVVY 300 FPRASTPEFC VKAPLIETAL QIRWCSGIRF KMAFETEDSS RISWFMGTIS SVQVADPLNW 360 PNSPWRLLQV TWDEPDLLQN VRRVSPWLVE LVSSMPAIHA SPFSPPRKKL RLPQHPDFPL 420 DGQIPVPTFP GNLLGPSNTN PFGCLPESTP AGMQGARHAH YGLSLSDHLN KVQSGLLPVG 480 FPPLDHAAMR MRVSNNLILQ KPRMSENISC LLSMANSTQS SKQLNDGKTT ELVLFGQKIL 540 TGQPISQSSS GDTVSPVPTG NCSSDGNADK VTNFSDGSGS ALHQQGQHER SSCDRFQWYR 600 DNCQETETSL ETGHCKVFME SEDVGRTMDL SLLRSYDELN RKLADMFGLE KSEMLSHVLY 660 RDVTGVVKHI GDEPFSDFTR TAKRLTILMD SGSDNVRV

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MITFMDSKEK SKEVERCLDP QLWHACAGGM VQMPAVNTKV YYFPQGHAEH ACGPVNFRAC  60
PKVPPLVPCK VVAIKYLADP ETDEVYAKLR LVPMNTNDVD YDRDAVGPET QEKPASFAKT  120
LTQSDANNGG GFSVPRYCAE TIFPRLDYSA DPPVQNILAK DVHGETWKFR HIYRGTPRRH  180
LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKK GIGGGPEASS GWNPAGGNCA  240
GPYGGFSPFL REDESRILRN GNSNGMNPSV SMMGRGKVRP EAVIEAATLA ANKQPFEVVY  300
FPRASTPEFC VKAPLIETAL QIRWCSGIRF KMAFETEDSS RISWFMGTIS SVQVADPLNW  360
PNSPWRLLQV TWDEPDLLQN VRRVSPWLVE LVSSMPAIHA SPFSPPRKKL RLPQHPDFPL  420
DGQIPVPTFP GNLLGPSNTN PFGCLPESTP AGMQGARHAH YGLSLSDHLN KVQSGLLPVG  480
FPPLDHAAMR MRVSNNLILQ KPRMSENISC LLSMANSTQS SKQLNDGKTT ELVLFGQKIL  540
TGQPISQSSS GDTVSPVPTG NCSSDGNADK VTNFSDGSGS ALHQQGQHER SSCDRFQWYR  600
DNCQETETSL ETGHCKVFME SEDVGRTMDL SLLRSYDELN RKLADMFGLE KSEMLSHVLY  660
RDVTGVVKHI GDEPFSDFTR TAKRLTILMD SGSDNVRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein