PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363600.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 741aa MW: 79072 Da PI: 5.9606

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	474	520	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_027363600.1 474 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 520 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 741 aa Download sequence
MPLYELYRLA GEKLGKETNS TRAPDQSSSP ENDFFELVWE NGQISSQGQS SRVRKSPSCR 60 SLPSHCLPSH SPKGRDKEVG YGINTRMGKL EDLDTGLNEI PMSVPSREVD LSQDEDVLPW 120 LDYTMDGSLQ HEYGSDFLHE LSDVTENNLP ASNNFTLLDK RGNGNMLFRD SHKISAEQGN 180 VSKGSSAELV ESARPKASTS QLYPPSSHQC QTSLVSARSR ASDITENNNK SNANQDVQYG 240 EIAQVLSSSS DFSGSKMQKK DPPMPSNGSS SSIMNFSHFA RPAAIVRANL QNIGSKSGLC 300 SARSDGMGIK NKGAAASSSN PPESILVDSG GECPKEPTMH CQQVVEQSKA DLKSLQPNSV 360 EQNALPSKQL EAACKESATN IDQTPNQVLG DCSTKGQTAA EKSMEPAVAS SSVCSGNGTD 420 RGSDEPNQSL KRKSKDTEDS ECHSEDVEEE SVGVKKAAAG RGGTGSKRSR AAEVHNLSER 480 RRRDRINEKM RALQELIPNC NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLYMPPMMLP 540 AGMQHMHAPH MVPFSPMGVG MHMGFGMGYG MGMPDMSGGS SRFPMIQMPQ MQGTHIPVAH 600 MSGPTALHGM ARSSSSGFGL PGQGHPMPMP RAPTFPFSGG PLMNSSGLGL HACGSSGHVE 660 TVDSASASGL KDQMPNVDPQ VKQSTGGCDL TSQIPTQCEA AAVGFEQSAL VRSSGHAHSS 720 EANDSGAVNP GKEDDLVLGY D

Sequence ? help Back to Top

Protein Sequence Length: 741 aa Download sequence

MPLYELYRLA GEKLGKETNS TRAPDQSSSP ENDFFELVWE NGQISSQGQS SRVRKSPSCR  60
SLPSHCLPSH SPKGRDKEVG YGINTRMGKL EDLDTGLNEI PMSVPSREVD LSQDEDVLPW  120
LDYTMDGSLQ HEYGSDFLHE LSDVTENNLP ASNNFTLLDK RGNGNMLFRD SHKISAEQGN  180
VSKGSSAELV ESARPKASTS QLYPPSSHQC QTSLVSARSR ASDITENNNK SNANQDVQYG  240
EIAQVLSSSS DFSGSKMQKK DPPMPSNGSS SSIMNFSHFA RPAAIVRANL QNIGSKSGLC  300
SARSDGMGIK NKGAAASSSN PPESILVDSG GECPKEPTMH CQQVVEQSKA DLKSLQPNSV  360
EQNALPSKQL EAACKESATN IDQTPNQVLG DCSTKGQTAA EKSMEPAVAS SSVCSGNGTD  420
RGSDEPNQSL KRKSKDTEDS ECHSEDVEEE SVGVKKAAAG RGGTGSKRSR AAEVHNLSER  480
RRRDRINEKM RALQELIPNC NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLYMPPMMLP  540
AGMQHMHAPH MVPFSPMGVG MHMGFGMGYG MGMPDMSGGS SRFPMIQMPQ MQGTHIPVAH  600
MSGPTALHGM ARSSSSGFGL PGQGHPMPMP RAPTFPFSGG PLMNSSGLGL HACGSSGHVE  660
TVDSASASGL KDQMPNVDPQ VKQSTGGCDL TSQIPTQCEA AAVGFEQSAL VRSSGHAHSS  720
EANDSGAVNP GKEDDLVLGY D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	479	484	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-47	bHLH family protein