PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027362958.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 475aa    MW: 53238.8 Da    PI: 6.3834
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027362958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS341.71.2e-1041174712374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     ++ L+ecA a+s ++l +a+++L +l + asp++ +  +R++ayf++A+a+r+ +s+ ++++ l   +       +  +a+++f++vsP++kf+h
  XP_027362958.1 117 ITILMECAVAISVENLGEAHKMLLELTQVASPYKaSCAERVVAYFAKAMASRVINSWLGVCSPLVDHK-------SIHSAFQVFNNVSPFIKFAH 204
                     678*****************************997889*****************9*99997665444.......456899************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +t NqaIleav+++e +HiiD+di+qGlQWpa+++ La+R egpp++ +Tg+g     s e l etg++L++fA++lg++++f++ +a+++ +++
  XP_027362958.1 205 FTSNQAILEAVSHCESIHIIDLDIMQGLQWPAFFHILATRMEGPPQVTMTGMGT----SMELLVETGKQLSNFARRLGMSLKFHP-LATKFGEVD 294
                     ******************************************************....9**************************.599****** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++L++++gE+laV++    h+l+d  ++  +    +L+l+ +l+P+++++veq++ h ++sFl+rf+ +l+yys+lfdsl a l+ ++  r+ v
  XP_027362958.1 295 VSMLQIRHGETLAVHWLQ--HSLYDAAGPDWK----TLRLLEELEPRIITLVEQDVIH-GGSFLDRFVASLHYYSTLFDSLGAYLHCDDASRHRV 382
                     *****************9..999988887777....*********************9.789********************************* PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+ ll++ei n++a  g +r  +  ++++Wr++l +  F +vp+s + ++qa+l+l++++  +gy++ + +g+l lgWkd +L+++SaW+
  XP_027362958.1 383 EHGLLSKEINNILAIGGPARSGED-KFRQWRSQLCRHCFVQVPMSVNSMAQAQLILNMFApAHGYSLAQIDGTLRLGWKDTSLYTASAWT 471
                     *******************77665.5***************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MMKVGFEVVH ANPNMIHPHM HGTWDYPNIS ANSLPLPAPT PSNLYPKPAS ENHCLNLGQN  60
ELCDWVEEHI GDITKHLVED LPETTPNNNN YTNLHIQTNT SGLDPDHNVY DHELNLITIL  120
MECAVAISVE NLGEAHKMLL ELTQVASPYK ASCAERVVAY FAKAMASRVI NSWLGVCSPL  180
VDHKSIHSAF QVFNNVSPFI KFAHFTSNQA ILEAVSHCES IHIIDLDIMQ GLQWPAFFHI  240
LATRMEGPPQ VTMTGMGTSM ELLVETGKQL SNFARRLGMS LKFHPLATKF GEVDVSMLQI  300
RHGETLAVHW LQHSLYDAAG PDWKTLRLLE ELEPRIITLV EQDVIHGGSF LDRFVASLHY  360
YSTLFDSLGA YLHCDDASRH RVEHGLLSKE INNILAIGGP ARSGEDKFRQ WRSQLCRHCF  420
VQVPMSVNSM AQAQLILNMF APAHGYSLAQ IDGTLRLGWK DTSLYTASAW TSRTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-129GRAS family protein