PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362888.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TALE

Protein Properties

Length: 374aa MW: 41926.6 Da PI: 5.7461

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.8	1.6e-07	312	344	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_027362888.1 312 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 344 59*****************************87 PP
2	ELK	29.5	1.7e-10	265	286	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+ +++++++E++ XP_027362888.1 265 ELKHELKQGYKDKIVDIREEIL 286 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MAFHDHLPHE ITFQPFTDEQ QLGQSRDMQR LLPLSAASGG GGAGPTWLNS NAATLRQQNF 60 LHLQPDSTAH QNDDVRGSMM GSEKSLDRNR TESNSEPDAL AEYKADILGH PLYDQLLSAH 120 VSCLRIATPV DQLPRIDAQL QQSQRVVDKY SGLGNGVVDD KELDQFMTHY VLLLCAFKEQ 180 LQQHVRVHAM EAVMACWELE QSLQSLTGVS PGEGTGATMS DDEEDQAESN ANLYEGSLDG 240 ADSLSFGPLV PTESERSLME RVRQELKHEL KQGYKDKIVD IREEILRKRR AGKLPGDTTS 300 LLKAWWQSHS KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHTNP SSSSGSKSKR 360 KSSGAGETSN QSFM

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MAFHDHLPHE ITFQPFTDEQ QLGQSRDMQR LLPLSAASGG GGAGPTWLNS NAATLRQQNF  60
LHLQPDSTAH QNDDVRGSMM GSEKSLDRNR TESNSEPDAL AEYKADILGH PLYDQLLSAH  120
VSCLRIATPV DQLPRIDAQL QQSQRVVDKY SGLGNGVVDD KELDQFMTHY VLLLCAFKEQ  180
LQQHVRVHAM EAVMACWELE QSLQSLTGVS PGEGTGATMS DDEEDQAESN ANLYEGSLDG  240
ADSLSFGPLV PTESERSLME RVRQELKHEL KQGYKDKIVD IREEILRKRR AGKLPGDTTS  300
LLKAWWQSHS KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHTNP SSSSGSKSKR  360
KSSGAGETSN QSFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-161	TALE family protein