PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362792.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 409aa MW: 45874.8 Da PI: 7.2063

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++G g+W++ +++ g++R++k+c++rw +yl XP_027362792.1 14 KGPWTPEEDQKLIAFIEEHGHGSWRALPAKAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53	7.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia++++ +Rt++++k++w+++l XP_027362792.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIASHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGRSPCCEKN GLKKGPWTPE EDQKLIAFIE EHGHGSWRAL PAKAGLRRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIASHLPKRT DNEIKNYWNT HLKKRLDRMG 120 IDPTTHKPKL ESLKDGSNLS HMAQWESARL EAEARLVRES KLILLQQNKP SSFTQTRLVL 180 NKITPQPSPP PCLDVLKACQ INDNKRTMHM PIHHSMYAMM LSTHDHHDLE SPTSTLCFPE 240 SLPIMNNANA VPMNVISTNN NPIGLINENY YLLPPTTVTT SSEGGANAIM TEANDGGSEY 300 LIKHTAEAEE NQKRNSMYDA MSCLQGDDDD IMVAVEAFRR AGYDNNVTLT TLSSNVVVGF 360 DNDMSVFGSY ENFGAGNNLD NINGSGSTCS TGDVNFEHKN YWNNLLGYK

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGRSPCCEKN GLKKGPWTPE EDQKLIAFIE EHGHGSWRAL PAKAGLRRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIASHLPKRT DNEIKNYWNT HLKKRLDRMG  120
IDPTTHKPKL ESLKDGSNLS HMAQWESARL EAEARLVRES KLILLQQNKP SSFTQTRLVL  180
NKITPQPSPP PCLDVLKACQ INDNKRTMHM PIHHSMYAMM LSTHDHHDLE SPTSTLCFPE  240
SLPIMNNANA VPMNVISTNN NPIGLINENY YLLPPTTVTT SSEGGANAIM TEANDGGSEY  300
LIKHTAEAEE NQKRNSMYDA MSCLQGDDDD IMVAVEAFRR AGYDNNVTLT TLSSNVVVGF  360
DNDMSVFGSY ENFGAGNNLD NINGSGSTCS TGDVNFEHKN YWNNLLGYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-102	MYB family protein