PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027362790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 306aa MW: 34684.5 Da PI: 9.0644 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.3 | 2e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv v+++G g+W++++++ g+ R++k+c++rw +yl XP_027362790.1 14 KGPWTPEEDKKLVASVEKHGHGNWRSVPAKAGLQRCGKSCRLRWMNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.5 | 9.6e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ eEd +++++++lG++ W+ Ia++++ +Rt++++k++w++ XP_027362790.1 67 RGNFSMEEDRTIIQLHALLGNR-WSIIAAHLP-KRTDNEIKNYWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MGRTPGCEKV GLKKGPWTPE EDKKLVASVE KHGHGNWRSV PAKAGLQRCG KSCRLRWMNY 60 LKPDIKRGNF SMEEDRTIIQ LHALLGNRWS IIAAHLPKRT DNEIKNYWNT NIKKRLMRMG 120 IDPKTHKAIK SNTCEEAYGG VHQFKDTNNI CHVAQWESVG VEYEARGSIF QLGSSSSFHL 180 PRLTISKIPT QPYPSSNSPS TKHNNTMYHM FALMLATDHV GVLHSPVSML SFPVSSLSSN 240 EWKFKEGSFS YKGDCDVKIQ NNNSLTQNYV SYLQDDDIMV AVEAFRERKC ESIPDLFDGD 300 CIGRCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 4e-80 | MYB family protein |