PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362789.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 448aa MW: 50316.4 Da PI: 6.9814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362789.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3e-16	141	186	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_027362789.1 141 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 186 899***************************.*********996 PP
2	Myb_DNA-binding	56.1	8.7e-18	193	236	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l +a++++G++ W+ Iar ++ gRt++ +k++w+ XP_027362789.1 193 RRAFSEEEEERLMQAHRMYGNK-WAMIARLFP-GRTDNAVKNHWHV 236 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MISSQQNQNT HTSSYPFASP SMGMVYEDMM GSLSLGSNYA TVSNNNFSLP QDSYYYACKS 60 SEVEHGRSTS WSFPFTREFL SSSFEDVEGK GSDCCSDGVG ENSESHEKIN HDAKFSEENN 120 PNEITVSGKE VDSGHSKLCA RGHWRPAEDS KLKELVALYG PQNWNLIAEK LEGRSGKSCR 180 LRWFNQLDPR INRRAFSEEE EERLMQAHRM YGNKWAMIAR LFPGRTDNAV KNHWHVIMAR 240 KYREQSSAYR RRRTSQSVYR RMERNPSFVC SRDNTLTTEI EPSSHSYCLN LLHNGVVLSN 300 NMTSFPSFHG IAAGGGVEFG LNGSSPHTSG RREAMSNTPH VGLCAQPTPF DFFSGGRSND 360 RTYEYDHRRS QLAGFYPHYA PQYVMAMQQL NNNHNFYSFS NSSASTTIAR EPSSSSLSVA 420 ETSDKVVISD PPDGVPPPFF DFLGVGAT

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MISSQQNQNT HTSSYPFASP SMGMVYEDMM GSLSLGSNYA TVSNNNFSLP QDSYYYACKS  60
SEVEHGRSTS WSFPFTREFL SSSFEDVEGK GSDCCSDGVG ENSESHEKIN HDAKFSEENN  120
PNEITVSGKE VDSGHSKLCA RGHWRPAEDS KLKELVALYG PQNWNLIAEK LEGRSGKSCR  180
LRWFNQLDPR INRRAFSEEE EERLMQAHRM YGNKWAMIAR LFPGRTDNAV KNHWHVIMAR  240
KYREQSSAYR RRRTSQSVYR RMERNPSFVC SRDNTLTTEI EPSSHSYCLN LLHNGVVLSN  300
NMTSFPSFHG IAAGGGVEFG LNGSSPHTSG RREAMSNTPH VGLCAQPTPF DFFSGGRSND  360
RTYEYDHRRS QLAGFYPHYA PQYVMAMQQL NNNHNFYSFS NSSASTTIAR EPSSSSLSVA  420
ETSDKVVISD PPDGVPPPFF DFLGVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-72	MYB family protein