PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362769.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 244aa MW: 28262.9 Da PI: 6.8722

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.8	1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_027362769.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	90.6	2.8e-30	81	174	7	100
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ e ++++ +qe+ kLk+++e Lq++qR+llGe+Le L++keL+qLe+qL++slk+iRs K++ +l+q+++lq+ke++l e+n+ Lr+klee XP_027362769.1 81 HHQPEMETQRRYQEYLKLKSKVEALQQTQRNLLGEELEHLDIKELEQLERQLDSSLKQIRSNKTQQMLDQLSDLQRKEEMLLETNNVLRNKLEE 174 55778899***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSG 60 TSMAKTLERY HRCSYGALEV HHQPEMETQR RYQEYLKLKS KVEALQQTQR NLLGEELEHL 120 DIKELEQLER QLDSSLKQIR SNKTQQMLDQ LSDLQRKEEM LLETNNVLRN KLEEINVTLQ 180 PTWEAREQNA SYNCHPPQSE GYYETAHCSS TLRIGYDTSV LNEAGGAAGT STQNASEFMH 240 GWME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-100	MIKC_MADS family protein