PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362744.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 222aa MW: 24444.9 Da PI: 8.9948

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	93.8	1.9e-29	4	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C++lr++C++dC+++p++ p++q++++ +++k++G++ +l+l++a++++ r ++++sl+yeA+ r+ +P yGa+g+++++++ +q+ XP_027362744.1 4 SCNGCRILRKGCSEDCIIRPCLewinsPESQANATLFLAKFYGRAGLLNLINAAQPHLRAAVFKSLMYEACGRIVNPAYGALGLFWTGEWARCQT 98 6********************************************************************************************** PP DUF260 91 kaelallkee 100 +++++l ++e XP_027362744.1 99 AVDAVLNGSE 108 *999887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MKLSCNGCRI LRKGCSEDCI IRPCLEWINS PESQANATLF LAKFYGRAGL LNLINAAQPH 60 LRAAVFKSLM YEACGRIVNP AYGALGLFWT GEWARCQTAV DAVLNGSEII TVEPSDWEGM 120 RTRGSEHGSP VLDIRHVSKR TGNVIRPKPR IGSVDSAALW NPVCGEEQRG RERCRSRETY 180 EASLIRRDKQ SRNGVAELNL ELTLGSGFSA SSVSSVRGYG RV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67100.1	6e-60	LBD family protein