PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362743.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 361aa MW: 40904.4 Da PI: 6.5788

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.1	3.2e-07	16	57	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +r C+ + +k++ ++C ++ +lC+ C + H H XP_027362743.1 16 ARACDFCARKRACWYCAADDAFLCQHCDYSVHTAnplarrHG 57 578***************************995456666665 PP
2	CCT	69.4	9e-24	303	346	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk a XP_027362743.1 303 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKTA 346 9****************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MIFTKTEANA VSAKTARACD FCARKRACWY CAADDAFLCQ HCDYSVHTAN PLARRHGRVR 60 LKTTSFKSLN NINCAPSWHK GFAKKPQTPR GDGKHTLKNP FDVVPEVGYD DMNSHEEGVE 120 QVLYRVPVCD NNHGLFVSSE IEVAEFDPDV EILLGKGVEN ECVGMEGLGL ADGKEYEYEH 180 SSWECCEDSG KVKVEMMMMG TEEAFELGFD CDDAPLTCEE VKEKIGLDEI NNGGELKEIN 240 DEETTKKILL LQLDYEAVIT AWATQKSPWT SADKPHLVSD HSMRRWGMEL HRPYGAAMED 300 GGREARVSRY REKRRTRLFS KKIRYEVRKL NAEKRPRMKG RFVKTASFVA VPPPTLPLPN 360 K

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MIFTKTEANA VSAKTARACD FCARKRACWY CAADDAFLCQ HCDYSVHTAN PLARRHGRVR  60
LKTTSFKSLN NINCAPSWHK GFAKKPQTPR GDGKHTLKNP FDVVPEVGYD DMNSHEEGVE  120
QVLYRVPVCD NNHGLFVSSE IEVAEFDPDV EILLGKGVEN ECVGMEGLGL ADGKEYEYEH  180
SSWECCEDSG KVKVEMMMMG TEEAFELGFD CDDAPLTCEE VKEKIGLDEI NNGGELKEIN  240
DEETTKKILL LQLDYEAVIT AWATQKSPWT SADKPHLVSD HSMRRWGMEL HRPYGAAMED  300
GGREARVSRY REKRRTRLFS KKIRYEVRKL NAEKRPRMKG RFVKTASFVA VPPPTLPLPN  360
K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	314	330	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	4e-86	CO-like family protein