PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362554.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 318aa MW: 35625.6 Da PI: 7.0629

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.9	2.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_027362554.1 14 KGPWSPEEDKILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	58.7	1.4e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE++l++++++ lG++ W++Ia++m+ gRt++++k++w+++l XP_027362554.1 67 RGKFSDEEEQLIINLHAVLGNK-WAAIASHMP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MMRTPSSDES GLKKGPWSPE EDKILVDYIQ KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SDEEEQLIIN LHAVLGNKWA AIASHMPGRT DNEIKNFWNT HLKKKLLQMG 120 LDPVTHRPRT DHLNLLSNLQ QILAAANIVN SFTNPCDINN ALRLQYTTMQ DSFLNDVLGL 180 NHSNLQNLFN GSVGFSSQIQ PNFQNFEATQ QPPQGGTNQH LNGGKNSSCG ESQRFDEQPG 240 STNANPSPTN SLPRLVSASP DLSPAKQEEN IVNSKDFSNP SSTTFELTWG DFMNEEASDA 300 YWKGFIDQHS NQPWSTVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	2e-97	MYB family protein