PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362432.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 28050.1 Da PI: 7.3042

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	82.1	3.6e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+n++ rqvtfskRr+g++KK +ELSvLCda++ +iifsstgk++ y++ XP_027362432.1 9 KRIQNTTTRQVTFSKRRTGLIKKTHELSVLCDAQIGLIIFSSTGKMFQYCT 59 79***********************************************96 PP
2	K-box	64.3	4.5e-22	72	172	2	100
K-box 2 qkssgks..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 q+s+g++ ++ e+l +++a L++e+ L+ + ++lGed++ L+++eL +Leq+Le+s+ k+R+++nell +q+e+l++ke+ ++een++L XP_027362432.1 72 QRSTGTRimERDHPREELFHDIAMLRQETLRLELGIQRYLGEDMGCLQYEELTKLEQELENSVAKVRNRQNELLQQQMENLRRKERIMEEENNNL 166 556666654455556888999************************************************************************** PP K-box 95 rkklee 100 ++ ++e XP_027362432.1 167 SNWIQE 172 987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRGKIEIKR IQNTTTRQVT FSKRRTGLIK KTHELSVLCD AQIGLIIFSS TGKMFQYCTE 60 PLRMEQIIEK YQRSTGTRIM ERDHPREELF HDIAMLRQET LRLELGIQRY LGEDMGCLQY 120 EELTKLEQEL ENSVAKVRNR QNELLQQQME NLRRKERIME EENNNLSNWI QEHRAVLEFQ 180 KATVEANKPV QVMDHFPFFE EQPAGSILQL ASPVLPHLHP YLQLAQPHNH NNGINSTIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23260.2	1e-61	MIKC_MADS family protein