PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027362301.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 459aa    MW: 51363.4 Da    PI: 6.3072
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027362301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.22.5e-92504562373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalkl.....fse 86 
                     ++lL++cA+a++s+d +laq++L+ l+++  pdgd++qRla  f++AL ar a+  ++ +k l++ +++++      ++++++   +     f++
  XP_027362301.1  50 EQLLVHCANAIESNDVTLAQQILWVLNNITPPDGDSNQRLAGSFLRALTARAAK--TGSCKMLEAVADAHSIndlaiHTHKFS---IielanFVD 139
                     79****************************************************..555555554444433312334333333...144488*** PP

            GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfe 177
                     ++P+++f++ +aN aIlea+eg + +Hi+D+++++++Q p+L++a+a+R e pp +++T+ gs+  +       ++ e+g +L +fA++ +v +e
  XP_027362301.1 140 LTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIANRHEVPPLIKLTVAGSACRDvppmLDLSYDELGTKLVNFARSKNVVME 234
                     ***************************************************************88888987788899****************** PP

            GRAS 178 fnvl.......vakrledleleeLrvkp.....gEalaVnlvlqlhrll................desvsleserdevLklvkslsPkvvvvveq 244
                     f+v+        a  ++ l++++L  +       Eal++n++++lh+++                 +s s +s r+ +Lk++++l P++vv+v++
  XP_027362301.1 235 FRVVsssyedgFAALIQHLRVQHLVYEAeghhpTEALVINCHMMLHYIPdetvalssisdsnsyvYSSSSASSLRSMFLKALRTLDPTIVVLVDE 329
                     ***977755544444555566666444377777******************************9988888888999******************* PP

            GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339
                     +ad++s++++ r+ +a++y +  +d++++ lpr s++r+++E+  + ++i+nv+a+eg +r+er e +++W++r+++a F+ +++se+ ++++k 
  XP_027362301.1 330 DADLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGLQRVERVEPKSRWEQRMRNANFHGISFSEDSVSEVKG 423
                     ********************************************.************************************************** PP

            GRAS 340 llrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +l +++  g+ ++ e++ lvl+Wk+++++++SaW
  XP_027362301.1 424 MLDEHA-AGWGLKREDEHLVLTWKGHNVIFASAW 456
                     ******.999************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    
MTQFTPPLHQ SPHFPNPTMN KNQIPRTRPW PGFPTSKSLG TSFGDANCME QLLVHCANAI  60
ESNDVTLAQQ ILWVLNNITP PDGDSNQRLA GSFLRALTAR AAKTGSCKML EAVADAHSIN  120
DLAIHTHKFS IIELANFVDL TPWHRFGFTA ANAAILEATE GFSVIHIVDL SLTHCMQIPT  180
LIDAIANRHE VPPLIKLTVA GSACRDVPPM LDLSYDELGT KLVNFARSKN VVMEFRVVSS  240
SYEDGFAALI QHLRVQHLVY EAEGHHPTEA LVINCHMMLH YIPDETVALS SISDSNSYVY  300
SSSSASSLRS MFLKALRTLD PTIVVLVDED ADLTSNNLVS RLRSAFNYLW IPYDTVDTFL  360
PRGSKQRQWY EADICWKIEN VIAHEGLQRV ERVEPKSRWE QRMRNANFHG ISFSEDSVSE  420
VKGMLDEHAA GWGLKREDEH LVLTWKGHNV IFASAWLPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-172GRAS family protein