PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027362085.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 599aa MW: 66846 Da PI: 7.9216

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027362085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.1	3.7e-12	284	340	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g XP_027362085.1 284 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqGRKGRQ-GGYDMEEKAARAYDMAALKYWG 340 78*****************87776554446655.77****************98 PP
2	AP2	42	2.4e-13	383	435	1	55
AP2 1 sgykGV.rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV +++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027362085.1 383 SIYRGVtSRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 435 579**99******988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MKPIENSDAI NINSQNNMLG FSLSPQMNIG VPSHLHQTQP LIAAAETVPP SFYHHTILHN 60 YGLYYGLEGE HVGMCSSLLP IMPLKSNGSL YGIEALSRSQ AQGELRLKPL LYSCVLVTMH 120 LSLDGVFYNQ LSCHGPNNLN NQIHVQENIS QQQYSYFPAM RNHNVILEGS KQRLSNIAED 180 EIPGLNSWVS RDFPISHAQE SNMTVPLKDS GGESGSIGSM TYGDLHSLSL SVSPSPQSSC 240 VTSSPTLIDS VAINTKKRGS EMVDQDQKRM VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA 300 HLWDNSCKKE GQGRKGRQGG YDMEEKAARA YDMAALKYWG PSTHTNFPLE NYQNQLEEMM 360 NMTRQEYVAH LRRKSSGFSR GASIYRGVTS RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE 420 EAAEAYDIAA IKFRGVNAVT NFDITRYDVD KIMASSNLLS SEQAKRNKEM NGGTRDEAKD 480 KKKASACKDT QEAIPMQNPP RIESCRTQSF SMALNNIFHQ EVEESSNMGT QLSNPSSLVT 540 SLSSSREESP DKTSLPMLFG MPATMSKLLT NVDSWDASSH LRPALSLPQM PVFTTWTDA

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MKPIENSDAI NINSQNNMLG FSLSPQMNIG VPSHLHQTQP LIAAAETVPP SFYHHTILHN  60
YGLYYGLEGE HVGMCSSLLP IMPLKSNGSL YGIEALSRSQ AQGELRLKPL LYSCVLVTMH  120
LSLDGVFYNQ LSCHGPNNLN NQIHVQENIS QQQYSYFPAM RNHNVILEGS KQRLSNIAED  180
EIPGLNSWVS RDFPISHAQE SNMTVPLKDS GGESGSIGSM TYGDLHSLSL SVSPSPQSSC  240
VTSSPTLIDS VAINTKKRGS EMVDQDQKRM VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA  300
HLWDNSCKKE GQGRKGRQGG YDMEEKAARA YDMAALKYWG PSTHTNFPLE NYQNQLEEMM  360
NMTRQEYVAH LRRKSSGFSR GASIYRGVTS RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE  420
EAAEAYDIAA IKFRGVNAVT NFDITRYDVD KIMASSNLLS SEQAKRNKEM NGGTRDEAKD  480
KKKASACKDT QEAIPMQNPP RIESCRTQSF SMALNNIFHQ EVEESSNMGT QLSNPSSLVT  540
SLSSSREESP DKTSLPMLFG MPATMSKLLT NVDSWDASSH LRPALSLPQM PVFTTWTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-125	AP2 family protein