PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27926.2 Da PI: 5.6187 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4.2e-19 | 63 | 113 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e r+p++ + r++lg++ t+e+Aa+a++ a+++l+g XP_027361994.1 63 PVYRGVRRRN-KNKWVCEMRVPNN---NSRIWLGTYPTPEMAARAHDVAALALRG 113 68*****888.7*********944...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MNTFKPSFHE LNYGIGEASS SSETSSSSHR IIRTSHSDEE VILASARPKK RAGRRVFNET 60 RHPVYRGVRR RNKNKWVCEM RVPNNNSRIW LGTYPTPEMA ARAHDVAALA LRGKSACLNF 120 ADSLWRLPLP ASTCAEDIRR AAVEAAESFA AEDSQHHLKQ SAKVTSVDYE VCSVGDNMVV 180 EDANDKPLQQ ERIYVDEVPA ASELEDLHEL LLSIADEPLM SPPPCARDGW GWNDVEIFDA 240 EVSLWNFSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 6e-41 | ERF family protein |