PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361986.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 293aa MW: 32121.2 Da PI: 6.7785

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.7	8.2e-43	8	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk lrrkC+++Cv+apyfp ++p++fa+vhk+FGasnv kll++l+ +r+da++sl+yeAear+rdPvyG+vg+i+ lq++l+q ++el+ XP_027361986.1 8 PCAACKCLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELSAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHKLRQIQVELN 102 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_027361986.1 103 NAKKE 107 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MSSSSNSPCA ACKCLRRKCT QECVFAPYFP PDNPQRFAYV HKVFGASNVA KLLNELSAAQ 60 RDDAVKSLAY EAEARLRDPV YGCVGLISVL QHKLRQIQVE LNNAKKELAT YIGPQAMQGM 120 HAPILQHHPN NPFSSTIYGN MPAVAAAAHG SQLMIRDAQP QQHQILEAQQ LAAAVVAREQ 180 QEMFRSYENQ QQQEFLRFSC GFEVGSVSSG GGFSQVSPGA ASADQLSPSL ALGSFDSAYH 240 MQQPQQGEPH PHPHPLPLEA QLLLPPQQKQ ESQLPLHQQQ PENEECRSVG PSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	1e-67	LBD family protein