PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361861.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27679.3 Da PI: 9.9637 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.3 | 1.5e-31 | 24 | 73 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ XP_027361861.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 73 79***********************************************8 PP | |||||||
2 | K-box | 117.9 | 9e-39 | 94 | 188 | 7 | 100 |
K-box 7 ks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ea+a+ +qqe++kL+++i+nLq+++R+++Ge+L+s++ k+L++Le++Lek++++iRskKnell+++ie++qk+e +l+++n+ Lr+k++e XP_027361861.1 94 AGsASEANAQFYQQEAEKLRAQISNLQNNNRQMMGESLGSMNAKDLKNLETKLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQLLRAKIAE 188 444899**************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MAFPNPSMSV SPQRKMGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60 IVFSSRGRLY EYANNSVKET IERYKKACSD SSGAGSASEA NAQFYQQEAE KLRAQISNLQ 120 NNNRQMMGES LGSMNAKDLK NLETKLEKGI SRIRSKKNEL LFAEIEYMQK REIDLHNNNQ 180 LLRAKIAESE RSQHNMTVLP VGTNYDSMQS QQQFDSRGYF QVTGLQPNNQ YARQDQMSLQ 240 LV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-115 | MIKC_MADS family protein |