PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361782.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25201.8 Da PI: 8.4357 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.2 | 9.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+n++ rqvtfskRr+g++KKA+EL +LCda+v v+ifsstgklyey+s XP_027361782.1 9 ERIDNSTSRQVTFSKRRKGLIKKAKELAILCDAQVGVVIFSSTGKLYEYAS 59 69***********************************************86 PP | |||||||
2 | K-box | 79.2 | 1e-26 | 80 | 169 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++e + +q+e++ L+++++nLq+++R+l+Ge+L Ls+++Lq Le+qLe sl+ +R kK+++l+++i+el +k + + +en +L kk+ XP_027361782.1 80 NSEPGVKFWQREAEFLRQQLQNLQENHRQLMGEQLYGLSVRNLQDLENQLEMSLQGVRMKKEQILRDEIQELNRKGNLIYQENVELYKKV 169 5778899*******************************************************************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MGRGKIVIER IDNSTSRQVT FSKRRKGLIK KAKELAILCD AQVGVVIFSS TGKLYEYAST 60 SMKSMIERYN TCKEEDQLTN SEPGVKFWQR EAEFLRQQLQ NLQENHRQLM GEQLYGLSVR 120 NLQDLENQLE MSLQGVRMKK EQILRDEIQE LNRKGNLIYQ ENVELYKKVY GTADMAATSR 180 NAFVPLPYAI HAGGHPQELI QLQLLQPEQE ACETSGSATK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 6e-86 | MIKC_MADS family protein |