PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361719.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 26441.6 Da PI: 9.7151 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.6 | 4.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k ien +nrqvt+skRrngi+KKA+ELSvLCda+v++i+fs+++kl+ey+s XP_027361719.1 9 KLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKLHEYIS 59 569**********************************************86 PP | |||||||
2 | K-box | 67.4 | 4.7e-23 | 76 | 172 | 6 | 99 |
K-box 6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLes..LslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 g l+ +++e++ ++l+kLk+ + +L+r++Rh++Ge+L+s Ls+++L++Le+++ s+ kiR++K +++++ +++ +kk ++l++ n +L + XP_027361719.1 76 GDIdLWRSHYEKMLENLKKLKDINIKLRRQIRHRIGEGLDSddLSFQQLRNLEEDMVASIGKIRERKIHVIKTRTDTCKKKVRSLEQMNGNLLLE 170 43359**********************************7444***********************************************99877 PP K-box 98 le 99 le XP_027361719.1 171 LE 172 65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MGRGKIEIKL IENPTNRQVT YSKRRNGIFK KAHELSVLCD AKVSLIMFSK NNKLHEYISP 60 GLTTKKIIDQ YQKTLGDIDL WRSHYEKMLE NLKKLKDINI KLRRQIRHRI GEGLDSDDLS 120 FQQLRNLEED MVASIGKIRE RKIHVIKTRT DTCKKKVRSL EQMNGNLLLE LEKCVIHPQF 180 LLHDEGDEES AVALANGASN LYAFCQHHTH LSLPHHGEPF KIDDLRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 7e-64 | MIKC_MADS family protein |