PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027361610.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 308aa    MW: 34235.2 Da    PI: 10.3838
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027361610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.6e-182065147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l+++vkq+G+ +W+ I++++  gR++k+c++rw++ 
   XP_027361610.1 20 RGHWRPAEDERLKQLVKQYGPQNWNFISEHLE-GRSGKSCRLRWYNQ 65
                     899*****************************.************96 PP
2Myb_DNA-binding44.92.7e-1472115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++++T e++e l+ ++k  G++ W++Iar ++ gRt++ +k++++ 
   XP_027361610.1  72 KKPFTDEDEETLLALHKVKGNK-WAAIARFFP-GRTDNAVKNHFHV 115
                      689*******************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRARSSRST STESKKSCNR GHWRPAEDER LKQLVKQYGP QNWNFISEHL EGRSGKSCRL  60
RWYNQLDPNI IKKPFTDEDE ETLLALHKVK GNKWAAIARF FPGRTDNAVK NHFHVLTARR  120
RRERLTLFGD TIGHNSRMNF NLQNYKNKGI FGVSSSQTPS TPWTLFSGSS TITSSFDASC  180
VVNKAHKDSS VSSSAAEKSS SSYDFEAVGS SILGSYHSFT APGLPSIGKV VPLPRKFSNY  240
NNYGHRTYVD SIKSSITGKT PRDNALCKSS TMISNEKEPL NLKQKGVSFI DFLGVGSSSA  300
HDDNISGP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119148RRRRERLTLFGDTIGHNSRMNFNLQNYKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33450.18e-59MYB family protein