PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 521aa MW: 58855.6 Da PI: 7.6965 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.3 | 2.1e-19 | 45 | 89 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rWT+eEd ll++ vk++ g++Wk+Ia++++ gRt+ qc +rwqk+l XP_027361605.1 45 RWTEEEDNLLIETVKKHHGRSWKKIAAYLP-GRTDVQCLHRWQKVL 89 9*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 62.2 | 1e-19 | 95 | 141 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ lv++v+++G ++W+ Ia++++ gR +kqc++rw+++l XP_027361605.1 95 KGSWTKEEDDCLVELVRKHGVKRWSVIAKYLP-GRIGKQCRERWHNHL 141 799*****************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 51.1 | 3e-16 | 147 | 189 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE++ l+ +++ +G++ W+ Iar ++ gRt++ +k++w+ XP_027361605.1 147 KDAWTEEEELTLAYYHQIYGSK-WAEIARILP-GRTDNAIKNHWN 189 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 521 aa Download sequence |
MLEVKKELKD FNADSPHLSS SKCNSDTSLP ESTPVTGKIK AQARRWTEEE DNLLIETVKK 60 HHGRSWKKIA AYLPGRTDVQ CLHRWQKVLN PDLVKGSWTK EEDDCLVELV RKHGVKRWSV 120 IAKYLPGRIG KQCRERWHNH LDPAIKKDAW TEEEELTLAY YHQIYGSKWA EIARILPGRT 180 DNAIKNHWNC SMKKKLDASP LRCDINVATS SFCASRIKPT PKVEDQSFNR IVSLDQSHWS 240 KHSVDYFSTK LILQNAAREE CCYENGCFEG ITPIASRQGG ESRLDNLPNE ILTGTCYEDH 300 VNAANPTCII KNMDSFLENS LDMLATNLSC FPLASAVTYS AYKSPKRQKV SFSDAEFIVG 360 DESDSPRLSY SKTINREKKC QSVRRSYNEI NSMPHDSDGM RGEYAYFPAE LPPGEDLAPP 420 TEFSECLSPK TPMTYADNKS RCSTPPTTLL RSYIGDISPE TVLKSLAMTY KNVPSIIRKR 480 TPRKASCCDS DQAPSGMITC TPEAENVIGF DNLTLNQGFM P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 6e-77 | MYB family protein |