PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361582.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 430aa MW: 48844.8 Da PI: 5.1325

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	3.1e-12	226	277	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_027361582.1 226 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 277 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MEKDHNYSAP PSMPPSFNTL DYSLDHHQLH LYPQNQQHQH LMKFQTSGEN NNSLVDYMPQ 60 TQPPPNPHGF YGTSSAGTTS YDKLSFADVM QFADFGPKLA LNQAKNCEES GIDPVYFLKF 120 PVLNDDKMEE DQNMMMNNNT DGGDGEAEND AERFNLVSVE DKCRLVGEEG MMREDEETRV 180 SDDNNSVQLR FLGHEDLHKN SSTVQENKNK RKRPRTVKTS EEVESQRMTH IAVERNRRKQ 240 MNEHLRVLRS LMPGSYVQRG DQASIIGGAI EFVRELEQLL QCLESQKRRR LLGEAQARQV 300 GDPTLTAQQP PFFPPLPLPN DQMKLVEMET GLHEETAESK SCLADVEVKL LGFDAMIKIL 360 SRRRPGQLIK TIAALEDLQL IILHTNITTI EQTVLYSFNV KVASDSRFTA EDIASSVQQI 420 FSFIHANTSM

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MEKDHNYSAP PSMPPSFNTL DYSLDHHQLH LYPQNQQHQH LMKFQTSGEN NNSLVDYMPQ  60
TQPPPNPHGF YGTSSAGTTS YDKLSFADVM QFADFGPKLA LNQAKNCEES GIDPVYFLKF  120
PVLNDDKMEE DQNMMMNNNT DGGDGEAEND AERFNLVSVE DKCRLVGEEG MMREDEETRV  180
SDDNNSVQLR FLGHEDLHKN SSTVQENKNK RKRPRTVKTS EEVESQRMTH IAVERNRRKQ  240
MNEHLRVLRS LMPGSYVQRG DQASIIGGAI EFVRELEQLL QCLESQKRRR LLGEAQARQV  300
GDPTLTAQQP PFFPPLPLPN DQMKLVEMET GLHEETAESK SCLADVEVKL LGFDAMIKIL  360
SRRRPGQLIK TIAALEDLQL IILHTNITTI EQTVLYSFNV KVASDSRFTA EDIASSVQQI  420
FSFIHANTSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	238	RMTHIAVERNRR
2	287	291	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-130	bHLH family protein