PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | YABBY | ||||||||
Protein Properties | Length: 216aa MW: 24230.4 Da PI: 5.1327 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 192.4 | 2.1e-59 | 6 | 162 | 2 | 166 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 ++f+ +eq+CyvqC+fC+til+vsvP +sl++vvtvrCGhCtsllsvn++kas +lla+ shl+ + + ++ +k+ +++sa XP_027361580.1 6 HLFDLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASfvpfHLLASLSHLEPKECSPEVDANKSL---------NSHSA 91 7899***********************************************998888889999986544333322222222.........22222 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166 ++ s + +e++ +p v++PPekrqr Psaynrfikeei+r+ka+ Pd++h+eafs+aaknWa fP+ XP_027361580.1 92 FMTTYS---DCEEEDVIPMSNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAEHPDMAHKEAFSTAAKNWANFPPT 162 222222...44566677777779*************************************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MSTLNHLFDL PEQICYVQCG FCTTILMVSV PCSSLSMVVT VRCGHCTSLL SVNMMKASFV 60 PFHLLASLSH LEPKECSPEV DANKSLNSHS AFMTTYSDCE EEDVIPMSNV VNKPPEKRQR 120 TPSAYNRFIK EEIKRLKAEH PDMAHKEAFS TAAKNWANFP PTQCKGDEES CSQTDQLADL 180 DSNVDPHDAE VNEEEGQGFR GRKVPRNSIL ERTPFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 2e-75 | YABBY family protein |