PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361511.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 324aa MW: 36366.3 Da PI: 9.2855

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.2e-12	152	198	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ +++ L l+P + kK++Ka++L A++Y+k+Lq XP_027361511.1 152 DHIMAERKRREKLSQSLIALAALIPGL-----KKMDKASVLGDAIKYVKELQ 198 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MDASAASWLS DLLFKETEDY NLFRQCHLNL LDDQEELLSS ALHQPMSSES YSVSSYSETL 60 SLRNSVSTDE TSLERPTKHL KTNNSCWNSK PSSPPSSPTS QILSFHNPKQ NKGFSVSPPQ 120 PRPRNVSKTR KYSTENPPKS QGRDKSPTHA QDHIMAERKR REKLSQSLIA LAALIPGLKK 180 MDKASVLGDA IKYVKELQER LRLLEEQSKN RDVESVVMVK KPQLSSEDHS DSRDDGGEKL 240 PHVEARVSEK DVLLRIHCPK RKGLLLKILV EIQNLHLFVV NSSVLPFGDS ILDITIVAQM 300 GTGYNLTIND LVKNLRVATL KSMS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	162	ERKRRE
2	158	163	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	8e-47	bHLH family protein