PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361304.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CPP

Protein Properties

Length: 770aa MW: 84461.6 Da PI: 6.379

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.9	6.1e-16	481	518	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk XP_027361304.1 481 CKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 518 89**********************************96 PP
2	TCR	50.2	5e-16	565	603	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_027361304.1 565 RHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNA 603 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MDTPERNQIN PPCSKFEDSP VFNYINSLSP IKPVKSVHIS QTFNSLSFSS PPSVFTSPHV 60 SCLKESRFLR RQYPLDASKP KVLSEDVNKV HSSEETLADS TRPHHNSGKL QENTDKGISV 120 GDSSIELLSE HTKFSVELPQ TLKYNCGSPG YDPPLCGDEA NSLLELPGEA ASDVAYVQEG 180 CKTDPVEGEV HFQEICQIEP KDEGPDCYWD SLIPNATDML IFNSPGEAEA FKGLMHKPLD 240 SSIRVCDFMP LLPQSTIDNG RKIHIVDSVA SGSEHEIEDH CSEPITATDR EQTQGNLANV 300 ALMTSNPNEK ANDELVSVTH RAIRRRCLDF EMASVRRKNS DDNSNTSSGV LQSDERNVGN 360 EKQQLPAKRN GNFQRGILRG IGLHLNALAA LKDYNGIQNE KSSSGTQLNL PSSSLQISTS 420 QDDQQLALVP VSSERELDPS DNGVQPAEDC YQAYMAGEDF NQSSPKKKRR KLEPAGETEG 480 CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQECFNKPIH EDTVLQTRKQ IESRNPLAFA 540 PKVIRSSDSV PDIGDDPNKT PASARHKRGC NCKKSNCLKK YCECYQGGVG CSISCRCEGC 600 KNAYGRKDGS APICLETDSE ETEASDKGVA EKALQKTEIQ NAEDHPDSAI VSTPLRLSRP 660 LLPLPFSSKG KPPRSFVTTI SGSALFASQK LGKPNHLWSQ AKHFQTVPDD EMPEILRGDS 720 SPITCIKTSS PNGKRISSPN CDLGSSPSRR GVRKLRLQAI PSFPSLTPHP

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MDTPERNQIN PPCSKFEDSP VFNYINSLSP IKPVKSVHIS QTFNSLSFSS PPSVFTSPHV  60
SCLKESRFLR RQYPLDASKP KVLSEDVNKV HSSEETLADS TRPHHNSGKL QENTDKGISV  120
GDSSIELLSE HTKFSVELPQ TLKYNCGSPG YDPPLCGDEA NSLLELPGEA ASDVAYVQEG  180
CKTDPVEGEV HFQEICQIEP KDEGPDCYWD SLIPNATDML IFNSPGEAEA FKGLMHKPLD  240
SSIRVCDFMP LLPQSTIDNG RKIHIVDSVA SGSEHEIEDH CSEPITATDR EQTQGNLANV  300
ALMTSNPNEK ANDELVSVTH RAIRRRCLDF EMASVRRKNS DDNSNTSSGV LQSDERNVGN  360
EKQQLPAKRN GNFQRGILRG IGLHLNALAA LKDYNGIQNE KSSSGTQLNL PSSSLQISTS  420
QDDQQLALVP VSSERELDPS DNGVQPAEDC YQAYMAGEDF NQSSPKKKRR KLEPAGETEG  480
CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQECFNKPIH EDTVLQTRKQ IESRNPLAFA  540
PKVIRSSDSV PDIGDDPNKT PASARHKRGC NCKKSNCLKK YCECYQGGVG CSISCRCEGC  600
KNAYGRKDGS APICLETDSE ETEASDKGVA EKALQKTEIQ NAEDHPDSAI VSTPLRLSRP  660
LLPLPFSSKG KPPRSFVTTI SGSALFASQK LGKPNHLWSQ AKHFQTVPDD EMPEILRGDS  720
SPITCIKTSS PNGKRISSPN CDLGSSPSRR GVRKLRLQAI PSFPSLTPHP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	465	471	PKKKRRK
2	465	472	PKKKRRKL
3	466	470	KKKRR
4	466	471	KKKRRK
5	467	471	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-139	CPP family protein