PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027361241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 163aa MW: 17823.6 Da PI: 9.2538 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 95.5 | 5.5e-30 | 2 | 104 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+ lr++C++dCvl+ ++ p++q++++ +v+++FG+++++++l+++p+++r+ +++sl+yeA ra +Pv+Gavg++++++++l+ql XP_027361241.1 2 SCNGCRALRKGCSEDCVLRHCLqwienPQAQAHATLFVARFFGRATLISFLSSVPTNQRSGMFRSLLYEAVGRAVNPVNGAVGLLWSGKWNLCQL 96 6********************************************************************************************** PP DUF260 91 kaelallk 98 +e +l++ XP_027361241.1 97 GVENVLRG 104 99987765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 163 aa Download sequence |
MSCNGCRALR KGCSEDCVLR HCLQWIENPQ AQAHATLFVA RFFGRATLIS FLSSVPTNQR 60 SGMFRSLLYE AVGRAVNPVN GAVGLLWSGK WNLCQLGVEN VLRGAALTPL PHHSSRKLFP 120 HVNVAQPHTL LGSCQPLMNS EMTTLPSTTG DTASQTKLLT LFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G49940.1 | 2e-58 | LBD family protein |