PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027361130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | WRKY | ||||||||
Protein Properties | Length: 312aa MW: 34227.9 Da PI: 9.8496 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.8 | 1.7e-31 | 241 | 298 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh+ XP_027361130.1 241 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLVVTYEGDHNHT 298 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MAVELMMGYR NDSFAEENAV QEAASGLESV EKLIRLLSQT QQQQYQSPME IETDCRAVAD 60 VAVSKFKNVI SLLGRTRTGH ARFRRAPLPP PTPQTQQPSS EPRVYHATPL QQIPPPTLQP 120 FILKNGLTET KDSSKTIYFS HSSAASSFVS SLTGDTDVKQ PCLSSPATAF QITNLSQVSS 180 AGKPPLFSSS TKRKCSSENL GSAKCGSSSG RCHCSKKRKM RLKRVVRVPA ISLKMADIPP 240 DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA LDDPSMLVVT YEGDHNHTLS 300 AAEATNLILE SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 1e-78 | WRKY family protein |