PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360796.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 292aa MW: 31121.7 Da PI: 7.8908

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33	1.4e-10	7	51	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W+ e d+ + +a + ++ + +W++Ia+ ++ g+t +++k+++ XP_027360796.1 7 EWSREQDKAFENALATYPEDapdRWEKIAADVP-GKTIEEIKLHYE 51 6******************************.********96 PP
2	Myb_DNA-binding	42	2.1e-13	118	162	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky XP_027360796.1 118 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 162 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MLSVLSEWSR EQDKAFENAL ATYPEDAPDR WEKIAADVPG KTIEEIKLHY ELLVEDINQI 60 ESGCVPLPPY NSSSEGSASH ASDDGAGKKG GSHGHYSSES NHGTKPSRSD QERRKGIAWT 120 EDEHRLFLLG LDKYGKGDWR SISRNFVVTR TPTQVASHAQ KYFIRLNSMN KDRRRSSIHD 180 ITSVNNGDIS APQGPITGQT NGSAGNSTGK VTKQAPPAST GVPGVGIYAA PTIGQPIGGP 240 LVSAVGTPVN LPAPAHMAYG VRASVPGAVV PGAPMNMGPV TYPMPHTSAP HR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-119	MYB family protein