PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027360716.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 280aa    MW: 31395.3 Da    PI: 7.5308
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027360716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.13e-18118172256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q  +Lee F+++++++ +++  LAk+lgL  rqV vWFqNrRa+ k
  XP_027360716.1 118 RKKLRLSKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTK 172
                     788899***********************************************98 PP
2HD-ZIP_I/II125.52.4e-40118207191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlsk+q+ +LEesF+e+++L+p++K +la++Lgl++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
  XP_027360716.1 118 RKKLRLSKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 207
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MTVDEQDLGL SLSLSFPHNP PLIPSSPHKP SWNHPFTSAE RDSETCRGEA GSFLRGIDVN  60
RLPSGVDCEE EAGVSSPNST VSSVSGKRSE RENNGEELDT DRACSRGISD EEDGETSRKK  120
LRLSKDQSII LEESFKEHNT LNPKQKLALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC  180
EFLKRCCENL TEENRRLQKE VQELRALKLS PQFYMQMTPP TTLTMCPSCE RVAVPHSAVD  240
AATRHHPIAP AHHRAFPIGP WATSAAAIPH RPFDALRPRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123SRKKLRL
2167175RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.14e-93HD-ZIP family protein