PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027360642.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25584 Da PI: 6.6845 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.6 | 1.6e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRr g++KKAeELSvLCda++a+iifsstgkl+eyss XP_027360642.1 10 KIDNATARQVTFSKRRRGLFKKAEELSVLCDADIALIIFSSTGKLFEYSS 59 69**********************************************96 PP | |||||||
2 | K-box | 50.5 | 8.8e-18 | 93 | 171 | 20 | 98 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++L ke+ + +++R+l GedL+ L+++eLqqLe+ Le++l ++ +kK e ++++i +lq+k l een++L++ + XP_027360642.1 93 NCSRLSKEVAEKSHQLRQLRGEDLQGLNIEELQQLERSLETGLGRVIEKKGEKIMNEITDLQRKGMLLMEENERLKRHV 171 678899999999999************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADIALIIFSS TGKLFEYSSS 60 SMKEILERHH LHSKNLAKLE QPSLELQLVE NSNCSRLSKE VAEKSHQLRQ LRGEDLQGLN 120 IEELQQLERS LETGLGRVIE KKGEKIMNEI TDLQRKGMLL MEENERLKRH VTGTINGQRL 180 GGADSENLVM DEGQSSESVT NVCNSTGPPQ DYESSDTSLK LGLPYNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-119 | MIKC_MADS family protein |