PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027360600.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 454aa    MW: 51307 Da    PI: 6.1044
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027360600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS457.21e-139274511374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v++g+le+a+++L+++s laspdgd+mqR++ayfteALa r++++++++ +al++++ s    see+ ++klf+e++P+lk+++
  XP_027360600.1  27 LIHLLLTCANHVAAGNLENANTTLEQISLLASPDGDTMQRITAYFTEALADRILKTWPGIHRALNSTRMS--MLSEEFLVQKLFFELFPFLKVAF 119
                     689*************************************************************999997..599999***************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI+ea+ege+ +HiiD+++ +++QW+aLlq L +Rpegpp+lRiTgv++    +ke l ++++rL++ Ae+l++pf+fn+ v+++le+l+
  XP_027360600.1 120 VLTNQAIVEAMEGEKIIHIIDLNAAEPAQWIALLQVLGARPEGPPHLRITGVHQ----KKEILDQVAHRLTEEAEKLDIPFQFNP-VVSQLENLD 209
                     ******************************************************....9**************************.799****** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll..............................................................desvslese 223
                     +++Lrvk+gEala++++lqlh+ll                                                              ++s+    +
  XP_027360600.1 210 FDKLRVKTGEALAISSILQLHTLLawddeamqrksplflkssngihlqrvlpvsqstlgdflekdmvngytpspdstssspasltaSNSM----N 300
                     ******************************************************************************999755333333....5 PP

            GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318
                      +++L+++++lsPkv+vv+eq+++hn++++++r+leal+ y+alfd+le++++r s er  vE++l+g+ei+n++aceg+errerhe+l kW +r
  XP_027360600.1 301 MESFLNALWGLSPKVMVVTEQDSNHNGPTLMDRLLEALYSYAALFDCLESTVSRSSLERLRVEKMLFGEEIKNIIACEGSERRERHEKLDKWFQR 395
                     577******************************************************************************************** PP

            GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ aGF++vpls++ + qa++ l+ ++ +gy++ +e+g+++++W+drp++s+SaWr
  XP_027360600.1 396 FDLAGFGNVPLSYFGMLQARRFLQSYGCEGYKMRDENGCVLICWQDRPMFSISAWR 451
                     *******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MMSLSPSLGS PHLLLREMKS EQRGLYLIHL LLTCANHVAA GNLENANTTL EQISLLASPD  60
GDTMQRITAY FTEALADRIL KTWPGIHRAL NSTRMSMLSE EFLVQKLFFE LFPFLKVAFV  120
LTNQAIVEAM EGEKIIHIID LNAAEPAQWI ALLQVLGARP EGPPHLRITG VHQKKEILDQ  180
VAHRLTEEAE KLDIPFQFNP VVSQLENLDF DKLRVKTGEA LAISSILQLH TLLAWDDEAM  240
QRKSPLFLKS SNGIHLQRVL PVSQSTLGDF LEKDMVNGYT PSPDSTSSSP ASLTASNSMN  300
MESFLNALWG LSPKVMVVTE QDSNHNGPTL MDRLLEALYS YAALFDCLES TVSRSSLERL  360
RVEKMLFGEE IKNIIACEGS ERRERHEKLD KWFQRFDLAG FGNVPLSYFG MLQARRFLQS  420
YGCEGYKMRD ENGCVLICWQ DRPMFSISAW RSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein