PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027360367.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Whirly
Protein Properties Length: 266aa    MW: 30292.4 Da    PI: 9.4476
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027360367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly144.54.3e-45812271139
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanatae...r.kydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvr 91 
                     s+y  k+ l+v ++ p+fe+ dsg++k++r+G lll++a++ ++   r +ydW++kq f+ls+ e+++++ l++++sce+fhd+++++s+  +vr
  XP_027360367.1  81 SIYTRKGVLTVSPRPPEFETKDSGAFKVSREGYLLLQFAPSDGTdgdRpQYDWSRKQIFSLSVSEMGTIIGLGARDSCELFHDSFKQKSE-VEVR 174
                     79**************************************9874222469************************************9986.69** PP

          Whirly  92 kalkvePlpdGsGlfvnlsvtns.....lvkgnesfsvPvskaefavlrsllv 139
                     k+lkvePlpd +G+++nl v+n+     + +++es+++Pv+ ae av+rs+++
  XP_027360367.1 175 KVLKVEPLPDATGHLFNLRVENQnkpenMDETQESIYIPVASAELAVFRSIFN 227
                     ********************98622222457999****************996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MMSQLHSSIT FKRTHPLTTP KFTSLKRNNV TFNTITFSIT LPSLSVKCHS SQLIQPKPFP  60
SPPQQRSPVG ELQRKFYVGY SIYTRKGVLT VSPRPPEFET KDSGAFKVSR EGYLLLQFAP  120
SDGTDGDRPQ YDWSRKQIFS LSVSEMGTII GLGARDSCEL FHDSFKQKSE VEVRKVLKVE  180
PLPDATGHLF NLRVENQNKP ENMDETQESI YIPVASAELA VFRSIFNYIM PYLLGWHAFA  240
NSIKPEVFSR ANTANPRFAA DYEWDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.13e-88Whirly family protein