PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027360367.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | Whirly | ||||||||
Protein Properties | Length: 266aa MW: 30292.4 Da PI: 9.4476 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 144.5 | 4.3e-45 | 81 | 227 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanatae...r.kydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvr 91 s+y k+ l+v ++ p+fe+ dsg++k++r+G lll++a++ ++ r +ydW++kq f+ls+ e+++++ l++++sce+fhd+++++s+ +vr XP_027360367.1 81 SIYTRKGVLTVSPRPPEFETKDSGAFKVSREGYLLLQFAPSDGTdgdRpQYDWSRKQIFSLSVSEMGTIIGLGARDSCELFHDSFKQKSE-VEVR 174 79**************************************9874222469************************************9986.69** PP Whirly 92 kalkvePlpdGsGlfvnlsvtns.....lvkgnesfsvPvskaefavlrsllv 139 k+lkvePlpd +G+++nl v+n+ + +++es+++Pv+ ae av+rs+++ XP_027360367.1 175 KVLKVEPLPDATGHLFNLRVENQnkpenMDETQESIYIPVASAELAVFRSIFN 227 ********************98622222457999****************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MMSQLHSSIT FKRTHPLTTP KFTSLKRNNV TFNTITFSIT LPSLSVKCHS SQLIQPKPFP 60 SPPQQRSPVG ELQRKFYVGY SIYTRKGVLT VSPRPPEFET KDSGAFKVSR EGYLLLQFAP 120 SDGTDGDRPQ YDWSRKQIFS LSVSEMGTII GLGARDSCEL FHDSFKQKSE VEVRKVLKVE 180 PLPDATGHLF NLRVENQNKP ENMDETQESI YIPVASAELA VFRSIFNYIM PYLLGWHAFA 240 NSIKPEVFSR ANTANPRFAA DYEWDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 3e-88 | Whirly family protein |