PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360345.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 564aa MW: 60614.2 Da PI: 5.3672

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7e-09	378	426	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_027360345.1 378 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 426 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MSDKEKFELD RNEDPMSYST GLPSDWRFGG ANLANSSVGL VAMGNSMNVS RGDLIGSSSC 60 SSASMVDSFG PNFWDHSTTS QNMGFCDISN VHNNGSSSNT GGIRKESFGF GRAGQDHHGT 120 LEMGWNPANS MLKGDGFLPN GPGMFPQSLS QFPTDSGFIE RAARFSCFSG GNFGDMVNSY 180 GIPQSMNLYA GSGGTMHGTR DAPAGHGLKS VTVGQSQESD LNVVEATKDV PSSVEHLTPK 240 GSPLKNDKRS ENHAVSQDEG KQALVRSANE SDRAESSDDG GGQDDSPMLE GTSEEPSIKG 300 LKKRKRSGQD VDNDKANGAP ELPSEGAKDN SECQQKGEQQ PTSTTKASGK NGKPGSQASD 360 PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN 420 YVQSLQRQVE FLSMKLATVN PRLDFNIEGL LAKDILQQRP GPSSALGFPL EMSMAFPPLH 480 PPQPGMIQPI IPNMPNSSDI LRRTIHPQLA PLSGGFKEPN QLPDVWEDEL HNVVQMSFAT 540 TAPLSSQDVD GNGTVPANQM KVEL

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MSDKEKFELD RNEDPMSYST GLPSDWRFGG ANLANSSVGL VAMGNSMNVS RGDLIGSSSC  60
SSASMVDSFG PNFWDHSTTS QNMGFCDISN VHNNGSSSNT GGIRKESFGF GRAGQDHHGT  120
LEMGWNPANS MLKGDGFLPN GPGMFPQSLS QFPTDSGFIE RAARFSCFSG GNFGDMVNSY  180
GIPQSMNLYA GSGGTMHGTR DAPAGHGLKS VTVGQSQESD LNVVEATKDV PSSVEHLTPK  240
GSPLKNDKRS ENHAVSQDEG KQALVRSANE SDRAESSDDG GGQDDSPMLE GTSEEPSIKG  300
LKKRKRSGQD VDNDKANGAP ELPSEGAKDN SECQQKGEQQ PTSTTKASGK NGKPGSQASD  360
PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN  420
YVQSLQRQVE FLSMKLATVN PRLDFNIEGL LAKDILQQRP GPSSALGFPL EMSMAFPPLH  480
PPQPGMIQPI IPNMPNSSDI LRRTIHPQLA PLSGGFKEPN QLPDVWEDEL HNVVQMSFAT  540
TAPLSSQDVD GNGTVPANQM KVEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	299	305	KGLKKRK
2	302	307	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-110	bHLH family protein