PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360114.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 349aa MW: 37919 Da PI: 4.7907

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1e-35	25	115	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++ ++lisw+e+g+sf+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k ll++ XP_027360114.1 25 FLTKTYQLVDDSSADDLISWNEDGTSFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFRRGEKGLLRD 110 9***************************************************************99.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_027360114.1 111 IQRRK 115 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAPIPAEQTG ESAPADSQRS IPTPFLTKTY QLVDDSSADD LISWNEDGTS FIVWRPAEFA 60 RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF RRGEKGLLRD IQRRKILPAA 120 ATPATTAATA NTVTVAVAAP AAPAVSPTTS GDEQVLSSNS SPIAAHNSNT VHRTTSCTTA 180 PELLEENERL RKENVQLSHE LSQLKGLCNN ILALMTNYAS TFSRQQLESS TSAVRAMPVP 240 EGKALELLPA KHVSVAEEAV HVGGAAGAAP CATANAEVPK LFGVSIGLKR CRTESEAEAE 300 EEEQNQTQTR SQTQTQSSQE PDPGSDVKSE PLDGDDSDDQ DHRWLELGK

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAPIPAEQTG ESAPADSQRS IPTPFLTKTY QLVDDSSADD LISWNEDGTS FIVWRPAEFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDCF RRGEKGLLRD IQRRKILPAA  120
ATPATTAATA NTVTVAVAAP AAPAVSPTTS GDEQVLSSNS SPIAAHNSNT VHRTTSCTTA  180
PELLEENERL RKENVQLSHE LSQLKGLCNN ILALMTNYAS TFSRQQLESS TSAVRAMPVP  240
EGKALELLPA KHVSVAEEAV HVGGAAGAAP CATANAEVPK LFGVSIGLKR CRTESEAEAE  300
EEEQNQTQTR SQTQTQSSQE PDPGSDVKSE PLDGDDSDDQ DHRWLELGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	4e-81	HSF family protein