PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027359868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27801.7 Da PI: 8.5839 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95 | 3.4e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaev +i+fs++gkl+ey++ XP_027359868.1 9 KRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVGLIVFSHKGKLFEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 107.1 | 2e-35 | 75 | 174 | 1 | 100 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y++++ + ++++++ +++ e+++Lk++++ Lqr++Rh++GedL s+slkeLq+LeqqL+++lk+iR+++n+l++e+i++lqkkek +qe+n++L XP_027359868.1 75 YAERQLVGNDSETQGNWTIEYTRLKAKVDLLQRNHRHYMGEDLASMSLKELQSLEQQLDTALKNIRTRRNDLMYESISDLQKKEKVIQEQNNMLA 169 56677888889999********************************************************************************* PP K-box 96 kklee 100 kk++e XP_027359868.1 170 KKIKE 174 **987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KAHEISVLCD AEVGLIVFSH KGKLFEYATD 60 SCMEKILERH ERYAYAERQL VGNDSETQGN WTIEYTRLKA KVDLLQRNHR HYMGEDLASM 120 SLKELQSLEQ QLDTALKNIR TRRNDLMYES ISDLQKKEKV IQEQNNMLAK KIKEKEQAVA 180 QHAAQWEQPN YRVDTSFLPQ QPVPSLNIGG NYHQEAPELG RNELDLTLEP LYSCHLGCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-108 | MIKC_MADS family protein |