PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359858.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 873aa MW: 96548.4 Da PI: 4.5752

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.4	1.2e-11	724	767	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+W++++ el+++av+q+G++ ++ I + ++ +t+ q+k+++ k XP_027359858.1 724 RGKWSKQDTELFYEAVRQFGTD-FSMIQQLFP-DKTRHQIKLKYKK 767 89******************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
MDPFDDIAPV APSRPGLKFM PKAKLKQLPR KEISVLDHAT SSTTFSDRPQ VEIPNSEDAT 60 NPKTKNSQQV SAKGHTVALV DDHLHSTIAA SDIDQIFTNF PRSASEAGPV DFEVGSGTNI 120 IPQTNLNTDG TQEPPKNGEG SFLDSSKCLE LVDNSLQVET DVGFKSDSDN KVAIFESNIQ 180 SKSNFGREQE VVSAEFELDP FSNVLPDPGA RNARKFQPKI KPRPRVGNSA ANASSSSNVM 240 TEKSVELPNS CMNEFQSNGD GSDRLNQSTS LPLPSQILRT TDLPNKPDYM SPSIPFSEDN 300 TGLAPVIPSQ LDSLNAMLLE VATHNGTRDW PSSFGKSSGE AADIFSGLES LDDFLTQAAS 360 DTGKPALHSF NEKGTDENFV NHNCRSINSF GVCDTTQVQR CPMYQTTQDS ITFNEAAVLN 420 EDDTHTNNRR LETKEVVDLN PACPGDDVFE YQSMKSGTDP TSETPVHEEL TNAADSPTLA 480 DFLHADVARE KDANERTKDG SISSSSRKNK RSSIIGEEDN DGNTSRQLRK QTAHKPTNSS 540 LNDDVEDDDN LDANGDELEE NGDDHEVDYS SKKGRASTSS KKKSGAKNGK TTQKRKRAND 600 DLEKTIKEPP KKFSHSTQRR KRTVDKALLE IPEDELDPRT LPIKDIILLA EYRERLAKKE 660 GTPQTTSTYQ SGGDFLHEAS ANYEEEEIFG SEDGRDPDDD RANGRIPSAS SLFNYQSFME 720 KAPRGKWSKQ DTELFYEAVR QFGTDFSMIQ QLFPDKTRHQ IKLKYKKEER QHPLRLSDAV 780 NNRAKDHSHF KLVIERLELA STKAEDDPSR DASDFMMGEE VTDLTPGTNE EVATTEQGAD 840 VKAQEDSAAV HSPEQSDDSD DDFQKWAQYK SAY

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

MDPFDDIAPV APSRPGLKFM PKAKLKQLPR KEISVLDHAT SSTTFSDRPQ VEIPNSEDAT  60
NPKTKNSQQV SAKGHTVALV DDHLHSTIAA SDIDQIFTNF PRSASEAGPV DFEVGSGTNI  120
IPQTNLNTDG TQEPPKNGEG SFLDSSKCLE LVDNSLQVET DVGFKSDSDN KVAIFESNIQ  180
SKSNFGREQE VVSAEFELDP FSNVLPDPGA RNARKFQPKI KPRPRVGNSA ANASSSSNVM  240
TEKSVELPNS CMNEFQSNGD GSDRLNQSTS LPLPSQILRT TDLPNKPDYM SPSIPFSEDN  300
TGLAPVIPSQ LDSLNAMLLE VATHNGTRDW PSSFGKSSGE AADIFSGLES LDDFLTQAAS  360
DTGKPALHSF NEKGTDENFV NHNCRSINSF GVCDTTQVQR CPMYQTTQDS ITFNEAAVLN  420
EDDTHTNNRR LETKEVVDLN PACPGDDVFE YQSMKSGTDP TSETPVHEEL TNAADSPTLA  480
DFLHADVARE KDANERTKDG SISSSSRKNK RSSIIGEEDN DGNTSRQLRK QTAHKPTNSS  540
LNDDVEDDDN LDANGDELEE NGDDHEVDYS SKKGRASTSS KKKSGAKNGK TTQKRKRAND  600
DLEKTIKEPP KKFSHSTQRR KRTVDKALLE IPEDELDPRT LPIKDIILLA EYRERLAKKE  660
GTPQTTSTYQ SGGDFLHEAS ANYEEEEIFG SEDGRDPDDD RANGRIPSAS SLFNYQSFME  720
KAPRGKWSKQ DTELFYEAVR QFGTDFSMIQ QLFPDKTRHQ IKLKYKKEER QHPLRLSDAV  780
NNRAKDHSHF KLVIERLELA STKAEDDPSR DASDFMMGEE VTDLTPGTNE EVATTEQGAD  840
VKAQEDSAAV HSPEQSDDSD DDFQKWAQYK SAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	581	597	KKKSGAKNGKTTQKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-45	MYB_related family protein